RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 DEPDC7Q96QD5 511 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 BOCQ9BWV1 1114 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 DPH1Q9BZG8 443 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
CTTN-209ENST00000525276 LRRC40Q9H9A6 602 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 BPIFA1Q9NP55 256 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 HOMER3Q9NSC5 361 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 TRNAU1APQ9NX07 287 aaKnown RBP11.34□□□□□ -0.59
CTTN-209ENST00000525276 IL17CQ9P0M4 197 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 VPS18Q9P253 973 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 CNOT6Q9ULM6 557 aaKnown RBP11.34□□□□□ -0.59
CTTN-209ENST00000525276 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 SATB2Q9UPW6 733 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 TMEM98Q9Y2Y6 226 aa11.34□□□□□ -0.59
CTTN-209ENST00000525276 C2orf81A6NN90 581 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 CDRT15L2A8MXV6 281 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 STX7O15400 261 aaKnown RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 PPFIA2O75334 1257 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 AP2A1O95782 977 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 GP1BAP07359 652 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 FDFT1P37268 417 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 SPAM1P38567 509 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 PDX1P52945 283 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 ILF3Q12906 894 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTTN-209ENST00000525276 OLIG2Q13516 323 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 SPARCL1Q14515 664 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 TAF1AQ15573 450 aaPredicted RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 BROXQ5VW32 411 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 KCTD11Q693B1 232 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 GALNT13Q8IUC8 556 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 TAB3Q8N5C8 712 aaPredicted RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 ARL10Q8N8L6 244 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 EXD3Q8N9H8 876 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 GLYATL1Q969I3 302 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 OR2M4Q96R27 311 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 GSDMCQ9BYG8 508 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 TMEM168Q9H0V1 697 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 RMI1Q9H9A7 625 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 ARNT2Q9HBZ2 717 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTTN-209ENST00000525276 GPR34Q9UPC5 381 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 DRG1Q9Y295 367 aaKnown RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
CTTN-209ENST00000525276 USP9YO00507 2555 aaPredicted RBP11.33□□□□□ -0.6
CTTN-209ENST00000525276 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 NBASA2RRP1 2371 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 E7EVH7 732 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 SLC28A2O43868 658 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 CRTAMO95727 393 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 FUCA1P04066 466 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 LPOP22079 712 aaPredicted RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 ADCY8P40145 1251 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 LMAN1P49257 510 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PDE1BQ01064 536 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 CLN3Q13286 438 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PEX6Q13608 980 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PYCR3Q53H96 274 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 DENND5AQ6IQ26 1287 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 GSTA5Q7RTV2 222 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 SLC35F3Q8IY50 421 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 LSMEM2Q8N112 164 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 FAM46DQ8NEK8 389 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 IFI44Q8TCB0 444 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 DTX3LQ8TDB6 740 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 BRSK1Q8TDC3 778 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 NAT6Q93015 286 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 ATXN7L3BQ96GX2 97 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 IL26Q9NPH9 171 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 PAK5Q9P286 719 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 PYCARDQ9ULZ3 195 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 ENTPD2Q9Y5L3 495 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 ARL5AQ9Y689 179 aa11.32□□□□□ -0.6
CTTN-209ENST00000525276 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
CTTN-209ENST00000525276 LRP4O75096 1905 aa11.31□□□□□ -0.6
CTTN-209ENST00000525276 GLYATL1P3A0A0U1RQE8 302 aa11.31□□□□□ -0.6
CTTN-209ENST00000525276 CPED1A4D0V7 1026 aa11.31□□□□□ -0.6
CTTN-209ENST00000525276 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
CTTN-209ENST00000525276 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
CTTN-209ENST00000525276 GPR89AB7ZAQ6 455 aa11.31□□□□□ -0.6
CTTN-209ENST00000525276 PGRMC1O00264 195 aaKnown RBP11.31□□□□□ -0.6
CTTN-209ENST00000525276 GPR89BP0CG08 455 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms