RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NEBLO76041 1014 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 UNC5CO95185 931 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 LYPLA2O95372 231 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 ABHD16AO95870 558 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 RXRAP19793 462 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CYP3A7P24462 503 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 UGT1A3P35503 534 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 NAMPTP43490 491 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CHN2P52757 468 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 RPS16P62249 146 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CTBP1Q13363 440 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 RAB32Q13637 225 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 GEN1Q17RS7 908 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 ZNF630Q2M218 657 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 IZUMO3Q5VZ72 239 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 DRICH1Q6PGQ1 229 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 Q71RC1 249 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 POLNQ7Z5Q5 900 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 PHC2Q8IXK0 858 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 MCPH1Q8NEM0 835 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 OR52N2Q8NGI0 321 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 NCOA7Q8NI08 942 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 SCAMP4Q969E2 229 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 NMD3Q96D46 503 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CCDC43Q96MW1 224 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 GFM1Q96RP9 751 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 TTLL2Q9BWV7 592 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 REXO4Q9GZR2 422 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 SIK2Q9H0K1 926 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 DCTPP1Q9H773 170 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 PLEKHA5Q9HAU0 1116 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 PADI4Q9UM07 663 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 SLC30A1Q9Y6M5 507 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 RNF212BA8MTL3 300 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 CAPN14A8MX76 684 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 M0QYG6 137 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 KCNN4O15554 427 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 FOXS1O43638 330 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 GRPP07492 148 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 GNA11P29992 359 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 MAGEA11P43364 429 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 RARRES1P49788 294 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PMS2P54278 862 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 HNRNPKP61978 463 aaKnown RBP eCLIP7.06□□□□□ -1.285e-7■□□□□ 9.7
NEDD8-203ENST00000524927 ZFP36L1Q07352 338 aaKnown RBP7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PDIA5Q14554 519 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 GRAMD1BQ3KR37 738 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 CRB2Q5IJ48 1285 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 TPGS1Q6ZTW0 290 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 DENND5BQ6ZUT9 1274 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 HTR3DQ70Z44 454 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PARS2Q7L3T8 475 aaKnown RBP7.06□□□□□ -1.28
NEDD8-203ENST00000524927 ANKS1BQ7Z6G8 1248 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 MYLK4Q86YV6 388 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-203ENST00000524927 SCN4BQ8IWT1 228 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 Q8NA96 180 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 TMIEQ8NEW7 156 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 CCDC12Q8WUD4 166 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-203ENST00000524927 GTF3C6Q969F1 213 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 MIEF2Q96C03 454 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 SELENOOQ9BVL4 669 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 ZNF518BQ9C0D4 1074 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 RSPH9Q9H1X1 276 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-203ENST00000524927 NEUROG2Q9H2A3 272 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 GPR35Q9HC97 309 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PRSS16Q9NQE7 514 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 RGL1Q9NZL6 768 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PCDHA12Q9UN75 941 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 LRCH1Q9Y2L9 728 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 NEU2Q9Y3R4 380 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 PLEKHM1Q9Y4G2 1056 aa7.06□□□□□ -1.28
NEDD8-203ENST00000524927 CCDC69A6NI79 296 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 PRAMEF26H0Y7S4 382 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 APOL1O14791 398 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 PPEF2O14830 753 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CHEK2O96017 543 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 TCN2P20062 427 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 HTR1EP28566 365 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 MCM5P33992 734 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 PGDP52209 483 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 POU6F2P78424 691 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CTTNQ14247 550 aaKnown RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 DRAP1Q14919 205 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 MIIPQ5JXC2 388 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 KLHDC7AQ5VTJ3 777 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 HIBCHQ6NVY1 386 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 JMJD6Q6NYC1 403 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CASC1Q6TDU7 716 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 RD3Q7Z3Z2 195 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 SLC15A4Q8N697 577 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 STARD8Q92502 1023 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 KIAA1191Q96A73 305 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 PIWIL1Q96J94 861 aaKnown RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 KLHL32Q96NJ5 620 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 RANBP9Q96S59 729 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms