RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SYT5O00445 386 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 KIF1CO43896 1103 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 LMX1BO60663 402 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ACTL6BO94805 426 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TRIM16O95361 564 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 PMS2P2O95744 297 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 LDLRP01130 860 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CSF1P09603 554 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 IQCF3P0C7M6 154 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 LINC00271P0C7V0 271 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 FGF5P12034 268 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CKMT1AP12532 417 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 EIF2S2P20042 333 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 ANOS1P23352 680 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 GSTM2P28161 218 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 GJC1P36383 396 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SERPINF1P36955 418 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TMPOP42166 694 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 PTPN9P43378 593 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 RPS9P46781 194 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 PCP4P48539 62 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CENPAP49450 140 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 RIPK4P57078 832 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CYP4A11Q02928 519 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 GABPAQ06546 454 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ACSM2AQ08AH3 577 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ST3GAL1Q11201 340 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 AIMP1Q12904 312 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 ITGA7Q13683 1181 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ACVR2BQ13705 512 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 KCNC3Q14003 757 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 GIT2Q14161 759 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 LPIN1Q14693 890 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 NONOQ15233 471 aaKnown RBP eCLIP1.71□□□□□ -2.14
CD44-212ENST00000524922 RALBP1Q15311 655 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CCDC96Q2M329 555 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 DUSP28Q4G0W2 176 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 XKR9Q5GH70 373 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 BEND3Q5T5X7 828 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TANGO2Q6ICL3 276 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 FOXL2NBQ6ZUU3 175 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TMEM179Q6ZVK1 233 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TUBA1AQ71U36 451 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SATL1Q86VE3 508 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TMC8Q8IU68 726 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 PI4KAP1Q8N8J0 262 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SUMF1Q8NBK3 374 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 DNAAF4Q8WXU2 420 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ARNTL2Q8WYA1 636 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 KCNJ9Q92806 393 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TOP1MTQ969P6 601 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 WBP2Q969T9 261 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 MSANTD3Q96H12 275 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TXNDC15Q96J42 360 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 PIGSQ96S52 555 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 MPHOSPH6Q99547 160 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 TUBA1CQ9BQE3 449 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 THUMPD2Q9BTF0 503 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 CLPBQ9H078 707 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 DNAJC18Q9H819 358 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ACAD9Q9H845 621 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 EVA1AQ9H8M9 152 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TLR8Q9NR97 1041 aaKnown RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 ATP8A2Q9NTI2 1148 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TMEM51Q9NW97 253 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 LRFN1Q9P244 771 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SWAP70Q9UH65 585 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SLC25A13Q9UJS0 675 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 KCND3Q9UK17 655 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 CEP83Q9Y592 693 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 PCDHAC2Q9Y5I4 1007 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 NFS1Q9Y697 457 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ZFP37Q9Y6Q3 630 aaPredicted RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 COL6A6A6NMZ7 2263 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 ZFHX3Q15911 3703 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TANC1Q9C0D5 1861 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 FANCMQ8IYD8 2048 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TEP1Q99973 2627 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 FLT1P17948 1338 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 IGHV4OR15-8A0A075B7B6 117 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 A0A087WV62 115 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 EFCAB8A8MWE9 144 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 KDM4EB2RXH2 506 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 B4DLN1 442 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 E9PAM4 449 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 WNT9BO14905 357 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 HNRNPRO43390 633 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ZG16O60844 167 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 KINO60870 393 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 FRAT2O75474 233 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 AKAP3O75969 853 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 VNN2O95498 520 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 SNAI1O95863 264 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 CH25HO95992 272 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 AMBPP02760 352 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 RETP07949 1114 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 HSPA5P11021 654 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 CYP4B1P13584 511 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 AMD1P17707 334 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms