RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SH2B2O14492 632 aaPredicted RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 ANKRD28O15084 1053 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 INSIG1O15503 277 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 PLOD3O60568 738 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 CLDN14O95500 239 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ALPLP05186 524 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ABCB1P08183 1280 aaPredicted RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 DAOP14920 347 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 UGT1A1P22309 533 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ITGB8P26012 769 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 CAPZA2P47755 286 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 SEC61A1P61619 476 aaKnown RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 TUBA1BP68363 451 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 LTBQ06643 244 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 IRAK1BP1Q5VVH5 260 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 GARNL3Q5VVW2 1013 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 TRNP1Q6NT89 227 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 SLC30A6Q6NXT4 461 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 BRAT1Q6PJG6 821 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 INTS8Q75QN2 995 aaKnown RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 KRT74Q7RTS7 529 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ADGRA1Q86SQ6 560 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 MAP7D3Q8IWC1 876 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 FOXRED2Q8IWF2 684 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 SCML4Q8N228 414 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 IL17RCQ8NAC3 791 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 B4GALNT2Q8NHY0 566 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 HMGCLL1Q8TB92 370 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 NEUROG1Q92886 237 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 TMEM19Q96HH6 336 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 DACH2Q96NX9 599 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 CENPOQ9BU64 300 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 KLHL4Q9C0H6 718 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 MMP27Q9H306 513 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ZNF224Q9NZL3 707 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 MARCH4Q9P2E8 410 aaPredicted RBP3.86□□□□□ -1.79
SKP1-212ENST00000523966 MALT1Q9UDY8 824 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 NRBP1Q9UHY1 535 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 HACL1Q9UJ83 578 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 POU2F3Q9UKI9 436 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 PLAGL1Q9UM63 463 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 ZNF148Q9UQR1 794 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 PTPRCP08575 1304 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 C15orf62A8K5M9 175 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 INO80B-WBP1J3KQ70 363 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 KDM4BO94953 1096 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 DNTTP04053 509 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 TUBBP07437 444 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 NGFRP08138 427 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 POLR2CP19387 275 aaPredicted RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 NR2F2P24468 414 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 APOBEC1P41238 236 aaKnown RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 MMP14P50281 582 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 PSMC6P62333 389 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 EEF1A1P68104 462 aaKnown RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 UBXN2AP68543 259 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 BNC1Q01954 994 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 ZNF155Q12901 538 aaPredicted RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 AIMP1Q12904 312 aaKnown RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 BAATQ14032 418 aaPredicted RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 RASA2Q15283 850 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 SF3B4Q15427 424 aaKnown RBP eCLIP3.85□□□□□ -1.797e-7■■■■□ 21.6
SKP1-212ENST00000523966 DLG2Q15700 870 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 EEF1A1P5Q5VTE0 462 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 DHRS7BQ6IAN0 325 aaPredicted RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 ZNF280DQ6N043 979 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 SFR1Q86XK3 245 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 LINC00346Q8IVM7 164 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 CHERPQ8IWX8 916 aaKnown RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 RASGEF1CQ8N431 466 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 MINDY1Q8N5J2 469 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 SLC5A8Q8N695 610 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 OR2AK2Q8NG84 335 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 PIGTQ969N2 578 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 PTERQ96BW5 349 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 ERLEC1Q96DZ1 483 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 SCMH1Q96GD3 660 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 MED30Q96HR3 178 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 ADGRG7Q96K78 797 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 LYZL4Q96KX0 146 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 CDRT15Q96T59 188 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 CCDC106Q9BWC9 280 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 WDR26Q9H7D7 661 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 UBTD1Q9HAC8 227 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 TAS2R14Q9NYV8 317 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 STK26Q9P289 416 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 CFDP1Q9UEE9 299 aaPredicted RBP3.85□□□□□ -1.79
SKP1-212ENST00000523966 AMACRQ9UHK6 382 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 PADI1Q9ULC6 663 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 FAM169AQ9Y6X4 670 aa3.85□□□□□ -1.79
SKP1-212ENST00000523966 SCRIBQ14160 1630 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 A0A0G2JPF8 293 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 LNP1A1A4G5 178 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 HNRNPCL3B7ZW38 293 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 PROB1E7EW31 1015 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 NDUFS4O43181 175 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 PAPSS1O43252 624 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms