RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 LRRN3Q9H3W5 708 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A7Q9HAW7 530 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A10Q9HAW8 530 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A8Q9HAW9 530 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 DRG1Q9Y295 367 aaKnown RBP16.19■□□□□ 0.18
PABPC1-221ENST00000522720 JRKLQ9Y4A0 524 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 KCTD3Q9Y597 815 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 PCDHB1Q9Y5F3 818 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 KIF26BQ2KJY2 2108 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF106Q9H2Y7 1883 aaKnown RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 A0A1W2PQM1 296 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ERI2A8K979 691 aaKnown RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 TAF4O00268 1085 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ZSCAN12O43309 604 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 LDB2O43679 373 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 RPLP0P05388 317 aaKnown RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ACTN2P35609 894 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 FDFT1P37268 417 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 CLCNKAP51800 687 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 TMEM115Q12893 351 aaPredicted RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 SPRED1Q7Z699 444 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 GDAP1Q8TB36 358 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF398Q8TD17 642 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 GFM1Q96RP9 751 aaKnown RBP16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ETNK1Q9HBU6 452 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 TBC1D29Q9UFV1 150 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ENTPD2Q9Y5L3 495 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 AK5Q9Y6K8 562 aa16.18■□□□□ 0.18
PABPC1-221ENST00000522720 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 RHPN2P1A8MT19 583 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 KMOO15229 486 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 GPR39O43194 453 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 B4GAT1O43505 415 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 SRP72O76094 671 aaKnown RBP16.17■□□□□ 0.18
PABPC1-221ENST00000522720 EML2O95834 649 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 TPH1P17752 444 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 CA5AP35218 305 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 HADHAP40939 763 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 GPR3P46089 330 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF140P52738 457 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-221ENST00000522720 B4GALNT1Q00973 533 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 NR1D2Q14995 579 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 LONRF2Q1L5Z9 754 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 LDLRAP1Q5SW96 308 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 IYDQ6PHW0 289 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 CRTC3Q6UUV7 619 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 LINC00523Q86TU6 105 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 LRRTM4Q86VH4 590 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF547Q8IVP9 402 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 SFRP1Q8N474 314 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 CCDC89Q8N998 374 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 DDHD1Q8NEL9 900 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 TIMM29Q9BSF4 260 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 SYNDIG1Q9H7V2 258 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 HOMER3Q9NSC5 361 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 SMOXQ9NWM0 555 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 SLC23A2Q9UGH3 650 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 PKD1L2Q7Z442 2459 aa16.17■□□□□ 0.18
PABPC1-221ENST00000522720 A6NCN8 305 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 SRRM3A6NNA2 597 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-221ENST00000522720 D6RAR5 112 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PPM1DO15297 605 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ZW10O43264 779 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 SUN1O94901 812 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PRAMEF1O95521 474 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ETS1P14921 441 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF7P17097 686 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-221ENST00000522720 FASLGP48023 281 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PDX1P52945 283 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 XIAPP98170 497 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 BIRC2Q13490 618 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 GPRC6AQ5T6X5 926 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 GLIS1Q8NBF1 620 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 OR13C4Q8NGS5 318 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ATXN7L3BQ96GX2 97 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PBKQ96KB5 322 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 TTC25Q96NG3 672 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ZCCHC2Q9C0B9 1178 aaKnown RBP16.16■□□□□ 0.18
PABPC1-221ENST00000522720 ASB8Q9H765 288 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 RAB6BQ9NRW1 208 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 KLC4Q9NSK0 619 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 PAK5Q9P286 719 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 FKBPLQ9UIM3 349 aa16.16■□□□□ 0.18
PABPC1-221ENST00000522720 TRBV23OR9-2A0A075B6M9 112 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 PRR19A6NJB7 356 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 OR5K4A6NMS3 321 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 AGAP14A8MT82 685 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 TMX2-CTNND1H3BSU7 103 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 SNX2O60749 519 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 ZSCAN5DPP0CG00 497 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 F3P13726 295 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 RPL22P35268 128 aaKnown RBP16.15■□□□□ 0.18
PABPC1-221ENST00000522720 LSSP48449 732 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 OR1D5P58170 312 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 NFATC2Q13469 925 aa16.15■□□□□ 0.18
PABPC1-221ENST00000522720 SEMA5AQ13591 1074 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms