RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CDK14O94921 469 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 PRAMEF1O95521 474 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 EML2O95834 649 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 RPLP0P05388 317 aaKnown RBP20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ZSCAN5DPP0CG00 497 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 PNLIPP16233 465 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 FDFT1P37268 417 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ZNF140P52738 457 aaPredicted RBP20.39■□□□□ 0.85
TRIM35-203ENST00000521253 PDE1BQ01064 536 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 CYP4F3Q08477 520 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 TMEM115Q12893 351 aaPredicted RBP20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ITGA9Q13797 1035 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 SPIDRQ14159 915 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ISXQ2M1V0 245 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 CCNJLQ8IV13 435 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 NXPE2Q96DL1 559 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 SMOXQ9NWM0 555 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 TBC1D29Q9UFV1 150 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ZMIZ1Q9ULJ6 1067 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 DRG1Q9Y295 367 aaKnown RBP20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ARHGEF17Q96PE2 2063 aaPredicted RBP20.39■□□□□ 0.85
TRIM35-203ENST00000521253 ERI2A8K979 691 aaKnown RBP20.38■□□□□ 0.85
TRIM35-203ENST00000521253 KCNJ1P48048 391 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 TMPRSS15P98073 1019 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 PLA2G4EQ3MJ16 856 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 LDLRAP1Q5SW96 308 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 GPRC6AQ5T6X5 926 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 ZNF438Q7Z4V0 828 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 SPRED1Q7Z699 444 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 LRRTM4Q86VH4 590 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 ZNF547Q8IVP9 402 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 SLC35F6Q8N357 371 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 PRELID2Q8N945 189 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 DDHD1Q8NEL9 900 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 ZNF398Q8TD17 642 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 NRSN2Q9GZP1 204 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 LRRN3Q9H3W5 708 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 RAB6BQ9NRW1 208 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 KLC4Q9NSK0 619 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 PAK5Q9P286 719 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 SLC23A2Q9UGH3 650 aa20.38■□□□□ 0.85
TRIM35-203ENST00000521253 ANKRD11Q6UB99 2663 aaPredicted RBP20.37■□□□□ 0.85
TRIM35-203ENST00000521253 TRBV23OR9-2A0A075B6M9 112 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 RHPN2P1A8MT19 583 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 TAF4O00268 1085 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 KMOO15229 486 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 SRP72O76094 671 aaKnown RBP20.37■□□□□ 0.85
TRIM35-203ENST00000521253 RPL22P35268 128 aaKnown RBP20.37■□□□□ 0.85
TRIM35-203ENST00000521253 PDX1P52945 283 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 XIAPP98170 497 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 SEMA5AQ13591 1074 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 GTF2H3Q13889 308 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 POU6F1Q14863 301 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 LINC00523Q86TU6 105 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 RASGEF1CQ8N431 466 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 SFRP1Q8N474 314 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 OR52K1Q8NGK4 314 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 PBKQ96KB5 322 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 GFM1Q96RP9 751 aaKnown RBP20.37■□□□□ 0.85
TRIM35-203ENST00000521253 C19orf43Q9BQ61 176 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 DKK4Q9UBT3 224 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 APC2O95996 2303 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 CELSR3Q9NYQ7 3312 aa20.37■□□□□ 0.85
TRIM35-203ENST00000521253 A6NCN8 305 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 USP27XA6NNY8 438 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 E7EVH7 732 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 CCL22O00626 93 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 PPM1DO15297 605 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 KIF5CO60282 957 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 SNX2O60749 519 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 SUN1O94901 812 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 ZNF7P17097 686 aaPredicted RBP20.36■□□□□ 0.85
TRIM35-203ENST00000521253 LMAN1P49257 510 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 CLCNKAP51800 687 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 B4GALNT1Q00973 533 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 NFATC2Q13469 925 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 BIRC2Q13490 618 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 SEPT6Q14141 434 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 NR1D2Q14995 579 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 RTP5Q14D33 572 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 INSCQ1MX18 579 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 GSTA5Q7RTV2 222 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 PROSER1Q86XN7 944 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 TRAPPC5Q8IUR0 188 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 RASGEF1AQ8N9B8 481 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 SLC37A2Q8TED4 501 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 ATXN7L3BQ96GX2 97 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 DNAJC1Q96KC8 554 aaKnown RBP20.36■□□□□ 0.85
TRIM35-203ENST00000521253 TTC25Q96NG3 672 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 TIMM29Q9BSF4 260 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 ZCCHC2Q9C0B9 1178 aaKnown RBP20.36■□□□□ 0.85
TRIM35-203ENST00000521253 OSGEPL1Q9H4B0 414 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 ASB8Q9H765 288 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 HOMER3Q9NSC5 361 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 ENTPD2Q9Y5L3 495 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 AK5Q9Y6K8 562 aa20.36■□□□□ 0.85
TRIM35-203ENST00000521253 KMT2BQ9UMN6 2715 aaPredicted RBP20.36■□□□□ 0.85
TRIM35-203ENST00000521253 COL27A1Q8IZC6 1860 aaPredicted RBP20.35■□□□□ 0.85
TRIM35-203ENST00000521253 D6RAR5 112 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms