RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 C1RP00736 705 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 ZDHHC11BP0C7U3 371 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 MAGEA11P43364 429 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 CYBRD1Q53TN4 286 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 GABPB2Q8TAK5 448 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 STAG3L4Q8TBR4 150 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 EID2BQ96D98 161 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 ASB2Q96Q27 587 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 ALG2Q9H553 416 aa8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 INTS10Q9NVR2 710 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-210ENST00000518825 IQCF5A8MTL0 148 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RSL1D1O76021 490 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TMCC1O94876 653 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PRAMEF12O95522 483 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ESRRBO95718 433 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 IDO1P14902 403 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PAX3P23760 479 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 MAPKAPK2P49137 400 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 MRPL19P49406 292 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RPS24P62847 133 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 LIPEQ05469 1076 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SELPLGQ14242 412 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ZNF235Q14590 738 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 FXNQ16595 210 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 FUT11Q495W5 492 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 COQ5Q5HYK3 327 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 NANOGP8Q6NSW7 305 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 IFNEQ86WN2 208 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 LGI2Q8N0V4 545 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TRIML2Q8N7C3 387 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 DRAXINQ8NBI3 349 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PAPD5Q8NDF8 572 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TRPV3Q8NET8 790 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CD200R1Q8TD46 325 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PIF1Q9H611 641 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 NANOGQ9H9S0 305 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 EVLQ9UI08 416 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RIMKLBQ9ULI2 386 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 MTMR11A4FU01 709 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 UPK1AO00322 258 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 BTN3A1O00481 513 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 EI24O14681 340 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 EEDO75530 441 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RASAL1O95294 804 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SERPINF2P08697 491 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ATF6P18850 670 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RFC2P35250 354 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 GATMP50440 423 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ARPP19P56211 112 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 OR4D2P58180 307 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ERVPABLB-1P60509 514 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TUBA4AP68366 448 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 FAM189BP81408 668 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 RING1Q06587 406 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CTXN3Q4LDR2 81 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 KRT80Q6KB66 452 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TMEM173Q86WV6 379 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CAMK1DQ8IU85 385 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 OFCC1Q8IZS5 231 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 HM13Q8TCT9 377 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CENPNQ96H22 339 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PSKH2Q96QS6 385 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ZIC5Q96T25 663 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 HBEGFQ99075 208 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 NTN4Q9HB63 628 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 BPIFA1Q9NP55 256 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SLC8A2Q9UPR5 921 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 INPP4BO15327 924 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SEPT4O43236 478 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TLR5O60602 858 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 KLKB1P03952 638 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CKBP12277 381 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 STT3AP46977 705 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 HTR6P50406 440 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SCNN1BP51168 640 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 GNA12Q03113 381 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ADRM1Q16186 407 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 CYP51A1Q16850 503 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TBC1D25Q3MII6 688 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 ANKS6Q68DC2 871 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 LETMD1Q6P1Q0 360 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 DLEU7Q6UYE1 221 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TAS1R1Q7RTX1 841 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 TMEM199Q8N511 208 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 PACRGLQ8N7B6 248 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
CTNNA1-210ENST00000518825 WBP2Q969T9 261 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms