RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 EDDM13A0A1B0GTR0 161 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 CDC7O00311 574 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 ZNF7P17097 686 aaPredicted RBP23.14■■□□□ 1.29
SLIT3-204ENST00000518140 MPSTP25325 297 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 ETV3P41162 512 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 PRKAA2P54646 552 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 KCNJ2P63252 427 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 E2F5Q15329 346 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 GPR33Q49SQ1 333 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 EGFLAMQ63HQ2 1017 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 SERPINA13PQ6UXR4 307 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 ALYREFQ86V81 257 aaKnown RBP23.14■■□□□ 1.29
SLIT3-204ENST00000518140 RBFAQ8N0V3 343 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 EXT2Q93063 718 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 TMEM237Q96Q45 408 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 CLPBQ9H078 707 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 CACNA2D2Q9NY47 1150 aa23.14■■□□□ 1.29
SLIT3-204ENST00000518140 TRMT6Q9UJA5 497 aaKnown RBP23.14■■□□□ 1.29
SLIT3-204ENST00000518140 E5RI56 91 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 ZNF195O14628 629 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 H2AFYO75367 372 aaKnown RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 PYGLP06737 847 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 PTPN5P54829 565 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 DNAJB13P59910 316 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 PTRHD1Q6GMV3 140 aaKnown RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 CPNE9Q8IYJ1 553 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 ARRDC3Q96B67 414 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 DERL2Q9GZP9 239 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 MBD1Q9UIS9 605 aaPredicted RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 ECI2O75521 394 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 IPO13O94829 963 aaKnown RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 CYP2A6P11509 494 aaPredicted RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 B4GALNT1Q00973 533 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 RCN2Q14257 317 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 ITPRIPL2Q3MIP1 535 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 VWA5B1Q5TIE3 1220 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 KDM1BQ8NB78 822 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 PIP4K2CQ8TBX8 421 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 KLHL29Q96CT2 875 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 PLEKHG4BQ96PX9 1271 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 CXorf56Q9H5V9 222 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 NCKIPSDQ9NZQ3 722 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 LMCD1Q9NZU5 365 aa23.13■■□□□ 1.29
SLIT3-204ENST00000518140 TSR3Q9UJK0 312 aaKnown RBP23.13■■□□□ 1.29
SLIT3-204ENST00000518140 MUC22E2RYF6 1773 aaPredicted RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 ZNF106Q9H2Y7 1883 aaKnown RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 UBXN8O00124 270 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 SPINT1O43278 529 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 DCTN3O75935 186 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 MTHFD2P13995 350 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 CD9P21926 228 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 XPAP23025 273 aaPredicted RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 MTHFRP42898 656 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 CCDC15Q0P6D6 951 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 TSNQ15631 228 aaKnown RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 ATOH8Q96SQ7 321 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 TFB2MQ9H5Q4 396 aaKnown RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 ARHGEF3Q9NR81 526 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 THAP10Q9P2Z0 257 aaPredicted RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 ZDHHC2Q9UIJ5 367 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 PCDHB1Q9Y5F3 818 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 COMMD10Q9Y6G5 202 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 PRUNE2Q8WUY3 3088 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 PRNPP04156 253 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 HNRNPLP14866 589 aaKnown RBP eCLIP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 ZNF30P17039 623 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 RPS3P23396 243 aaKnown RBP eCLIP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 WASP42768 502 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 SETDB1Q15047 1291 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 DPPA4Q7L190 304 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 WDR75Q8IWA0 830 aaKnown RBP23.12■■□□□ 1.29
SLIT3-204ENST00000518140 HCAR2Q8TDS4 363 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 OR8D1Q8WZ84 308 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 KIAA1191Q96A73 305 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 SKA1Q96BD8 255 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 LINGO1Q96FE5 620 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 TTC1Q99614 292 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 DHRS7Q9Y394 339 aa23.12■■□□□ 1.29
SLIT3-204ENST00000518140 KIAA1549LQ6ZVL6 1849 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 NPEPPSL1A6NEC2 478 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 TRIM16O95361 564 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 PPARGP37231 505 aaPredicted RBP23.11■■□□□ 1.29
SLIT3-204ENST00000518140 MMP12P39900 470 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 LYPLAL1Q5VWZ2 237 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 FAM219BQ5XKK7 198 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 ASRGL1Q7L266 308 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 SMRP1Q8NCR6 262 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 WRAP53Q9BUR4 548 aaKnown RBP23.11■■□□□ 1.29
SLIT3-204ENST00000518140 SPATA16Q9BXB7 569 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 FAM83DQ9H4H8 585 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 PKD2L2Q9NZM6 624 aa23.11■■□□□ 1.29
SLIT3-204ENST00000518140 LRRC14BA6NHZ5 514 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 SLC25A14O95258 325 aaPredicted RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 GM2AP17900 193 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 IGFBP4P22692 258 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 GRIA2P42262 883 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 SKIV2L2P42285 1042 aaKnown RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 IL2P60568 153 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 ELAVL3Q14576 367 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms