RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 NEU2Q9Y3R4 380 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 CTAGE9A4FU28 777 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 AP3B1O00203 1094 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 KMOO15229 486 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 NUDT21O43809 227 aaKnown RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 PRAMEF1O95521 474 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ECEL1O95672 775 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 GAS8O95995 478 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 KRT14P02533 472 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ADRA1DP25100 572 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ACTR1BP42025 376 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 NPY2RP49146 381 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ACTR1AP61163 376 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 BASP1P80723 227 aaKnown RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 TMPRSS15P98073 1019 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 NFATC2Q13469 925 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 HLTFQ14527 1009 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 TRIP13Q15645 432 aaPredicted RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 GPR33Q49SQ1 333 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 C14orf28Q4W4Y0 310 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 PERM1Q5SV97 790 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 GPRC6AQ5T6X5 926 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 CDCP2Q5VXM1 449 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 IYDQ6PHW0 289 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 EFL1Q7Z2Z2 1120 aaKnown RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ZNF547Q8IVP9 402 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 NAGSQ8N159 534 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 KYQ8NBH2 561 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 DDHD1Q8NEL9 900 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 RANBP9Q96S59 729 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 NAPGQ99747 312 aaPredicted RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 LRIT1Q9P2V4 623 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 SLC23A2Q9UGH3 650 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 RIMKLBQ9ULI2 386 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 LRP4O75096 1905 aa11.01□□□□□ -0.65
SCARNA20-201ENST00000516768 ARHGEF17Q96PE2 2063 aaPredicted RBP11□□□□□ -0.65
SCARNA20-201ENST00000516768 GOLGA6L10A0A0M3HER8 536 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 HEATR9A2RTY3 570 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 B4DGG1 531 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 FANCGO15287 622 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 GPR39O43194 453 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 KCNJ13O60928 360 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 PHF2O75151 1096 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 MT-CO3P00414 261 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 ACP5P13686 325 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
SCARNA20-201ENST00000516768 MAGEA6P43360 314 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 FNTAP49354 379 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 GPS1Q13098 491 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 TARDBPQ13148 414 aaKnown RBP eCLIP11□□□□□ -0.65
SCARNA20-201ENST00000516768 CAMK2BQ13554 666 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 KCTD19Q17RG1 926 aaPredicted RBP11□□□□□ -0.65
SCARNA20-201ENST00000516768 CCDC38Q502W7 563 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 SNX20Q7Z614 316 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 C11orf96Q7Z7L8 435 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 LRRTM4Q86VH4 590 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 ARL14Q8N4G2 192 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 DCBLD1Q8N8Z6 715 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 RASGEF1AQ8N9B8 481 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 MAPK15Q8TD08 544 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 ZNF514Q96K75 400 aaPredicted RBP11□□□□□ -0.65
SCARNA20-201ENST00000516768 DNAJC1Q96KC8 554 aaKnown RBP11□□□□□ -0.65
SCARNA20-201ENST00000516768 KLC4Q9NSK0 619 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 RNF14Q9UBS8 474 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 TBC1D29Q9UFV1 150 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 SLC30A1Q9Y6M5 507 aa11□□□□□ -0.65
SCARNA20-201ENST00000516768 RP1P56715 2156 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TRBV5-4A0A0C4DH59 114 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TCRBV7S3A2A0A539 114 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 FAM149AA5PLN7 773 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 A6NCN8 305 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 PRR19A6NJB7 356 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 CCL22O00626 93 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 NTN3O00634 580 aaPredicted RBP10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 PPM1DO15297 605 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 B4GAT1O43505 415 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 POP7O75817 140 aaKnown RBP10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 EML2O95834 649 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TPSB2P20231 275 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 MC4RP32245 332 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 CDKN1CP49918 316 aaPredicted RBP10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 ARSDP51689 593 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 CLDN6P56747 220 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 ETF1P62495 437 aaKnown RBP10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 ACVR1Q04771 509 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 SEPT6Q14141 434 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TPSAB1Q15661 275 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 PCID2Q5JVF3 399 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TSTD2Q5T7W7 516 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 HES3Q5TGS1 186 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 LRRC8BQ6P9F7 803 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 TMEM220Q6QAJ8 160 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 NLRP9Q7RTR0 991 aa10.99□□□□□ -0.65
SCARNA20-201ENST00000516768 MARCH9Q86YJ5 346 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms