RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ARMC9Q7Z3E5 817 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ARID3BQ8IVW6 561 aaPredicted RBP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 CEP97Q8IW35 865 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ADHFE1Q8IWW8 467 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 RBMXL3Q8N7X1 1067 aaKnown RBP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 CCDC89Q8N998 374 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC38A9Q8NBW4 561 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 MAGEC3Q8TD91 643 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 JAKMIP2Q96AA8 810 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM19Q96HH6 336 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 CCDC34Q96HJ3 373 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 MED30Q96HR3 178 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ADGRG7Q96K78 797 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 CEP295NLQ96MC4 621 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 NUDCD1Q96RS6 583 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 CSTL1Q9H114 145 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 SIL1Q9H173 461 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 TSPYL4Q9UJ04 414 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PTPRCP08575 1304 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 LNP1A1A4G5 178 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 ZNF217O75362 1048 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 NR2F1P10589 423 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 HLA-DOBP13765 273 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 MYOD1P15172 320 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 PRLRP16471 622 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TRIM21P19474 475 aaKnown RBP5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TMPOP42166 694 aaKnown RBP5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 PPP2R2BQ00005 443 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 PDE1BQ01064 536 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 NTRK2Q16620 822 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 SYT16Q17RD7 645 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 CFAP58Q5T655 872 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 GFRALQ6UXV0 394 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 C16orf82Q7Z2V1 217 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 GPR180Q86V85 440 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM219Q86XT9 240 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 ZNF441Q8N8Z8 693 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 C9orf106Q8NAJ2 232 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 GSDMBQ8TAX9 411 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 NUDCD2Q8WVJ2 157 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TEX12Q9BXU0 123 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TM6SF1Q9BZW5 370 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM39BQ9GZU3 492 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 DNAJC18Q9H819 358 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 CD93Q9NPY3 652 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM30AQ9NV96 361 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 ARHGEF38Q9NXL2 777 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 DNAJB4Q9UDY4 337 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 MALT1Q9UDY8 824 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 AMDHD2Q9Y303 409 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 TAF1P21675 1872 aa5.03□□□□□ -1.6
HMGCS1-207ENST00000514610 PASKQ96RG2 1323 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 SH2B2O14492 632 aaPredicted RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 RSL1D1O76021 490 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 ITGA2P17301 1181 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 NNMTP40261 264 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 KRTAP10-11P60412 298 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 ISL1P61371 349 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 RELQ04864 619 aaPredicted RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 CXCL9Q07325 125 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 SNTA1Q13424 505 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 KEAP1Q14145 624 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 MVPQ14764 893 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 LRCH2Q5VUJ6 765 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 C9orf57Q5W0N0 161 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 FAM122CQ6P4D5 195 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 RAD9BQ6WBX8 426 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 EPHX4Q8IUS5 362 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 MCEMP1Q8IX19 187 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 SLC38A5Q8WUX1 472 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 PRPF31Q8WWY3 499 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 PIGTQ969N2 578 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 RTP4Q96DX8 246 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 QRFPRQ96P65 431 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 ABHD1Q96SE0 405 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 DDOQ99489 341 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 SEMA3CQ99985 751 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 PPIL3Q9H2H8 161 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 LRRC4Q9HBW1 653 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 GIMAP4Q9NUV9 329 aa5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 TRMT1Q9NXH9 659 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 MRPL15Q9P015 296 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 DBNLQ9UJU6 430 aaKnown RBP5.02□□□□□ -1.61
HMGCS1-207ENST00000514610 A0A0G2JPF8 293 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 C4orf47A7E2U8 309 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 HNRNPCL3B7ZW38 293 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 KCNAB3O43448 404 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 HNRNPCL4P0DMR1 293 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 T-ENOLP0DO92 83 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 IL11P20809 199 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 SAT1P21673 171 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 TMF1P82094 1093 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 COG7P83436 770 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 ZBTB17Q13105 803 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 CCDC96Q2M329 555 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF585BQ52M93 769 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 RAB6CQ53S08 254 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms