RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 GTF2IRD1Q9UHL9 959 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ST14Q9Y5Y6 855 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 PMF1-BGLAPU3KQ54 211 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 BCLAF3A2AJT9 711 aaKnown RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 C9IYK1 514 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 AGRPO00253 132 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 FGF1P05230 155 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CKMT2P17540 419 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 GJA9P57773 515 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ADHFE1Q8IWW8 467 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF540Q8NDQ6 660 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 KBTBD7Q8WVZ9 684 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CCDC3Q9BQI4 270 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 SDCBP2Q9H190 292 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 STOML2Q9UJZ1 356 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 SPACA6W5XKT8 324 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 NDUFS2O75306 463 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ACRP10323 421 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 OR7D4Q8NG98 312 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 MT-CYBP00156 380 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 NRLP54845 237 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 RAB39AQ14964 217 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 QPRTQ15274 297 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TAB1Q15750 504 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 FAM91A1Q658Y4 838 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TXNRD3NBQ6F5E7 133 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ATG16L2Q8NAA4 619 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TOP1MTQ969P6 601 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 PPP1R16AQ96I34 528 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TBC1D14Q9P2M4 693 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ANXA5P08758 320 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 GPR1P46091 355 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TMBIM6P55061 237 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 CDH13P55290 713 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 GRM2Q14416 872 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 Q6ZNX1 250 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 GPR180Q86V85 440 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ZC3H7AQ8IWR0 971 aaKnown RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 CDYL2Q8N8U2 506 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 H2AFY2Q9P0M6 372 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ZFP37Q9Y6Q3 630 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 H0YJX3 145 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 HTRA2O43464 458 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 CLDN11O75508 207 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TPSB2P20231 275 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 PTPN3P26045 913 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 SLC16A1P53985 500 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TPSAB1Q15661 275 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 SELENOMQ8WWX9 145 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 MFSD3Q96ES6 412 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF347Q96SE7 839 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TMEM245Q9H330 911 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 CCNB1IP1Q9NPC3 277 aa13.05□□□□□ -0.32
TCOF1-213ENST00000514442 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 SLC22A1O15245 554 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 RGS14O43566 566 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 VPS4BO75351 444 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 SLC5A2P31639 672 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 MAPK8P45983 427 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 INHBCP55103 352 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 GNG2P59768 71 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 IRF8Q02556 426 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 GRB14Q14449 540 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF792Q3KQV3 632 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 OR4K2Q8NGD2 314 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 FBXO27Q8NI29 283 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 HMCESQ96FZ2 354 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 MYO19Q96H55 970 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 MRPL57Q9BQC6 102 aaKnown RBP13.04□□□□□ -0.32
TCOF1-213ENST00000514442 IFT80Q9P2H3 777 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-213ENST00000514442 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-213ENST00000514442 CNOT11Q9UKZ1 510 aaKnown RBP13.04□□□□□ -0.32
TCOF1-213ENST00000514442 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 TMEM63AO94886 807 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 PRLP01236 227 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 IL1R2P27930 398 aa13.04□□□□□ -0.32
TCOF1-213ENST00000514442 MYBPC1Q00872 1141 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms