RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RALBP11234 206 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ME2P23368 584 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 GSTM2P28161 218 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 NDST1P52848 882 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CSE1LP55060 971 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 LIPMQ5VYY2 423 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 RSPO2Q6UXX9 243 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FAM183BPQ6ZVS7 135 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TAS1R1Q7RTX1 841 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FAM35AQ86V20 835 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM130Q8N3G9 435 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 EFCAB3Q8N7B9 438 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FATE1Q969F0 183 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SH3YL1Q96HL8 342 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 KCTD15Q96SI1 283 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 HOXD1Q9GZZ0 328 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 COPS7BQ9H9Q2 264 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CYP4F11Q9HBI6 524 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 USE1Q9NZ43 259 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 GMIPQ9P107 970 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ANKMY1Q9P2S6 941 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FZD10Q9ULW2 581 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MYRFQ9Y2G1 1151 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MFHAS1Q9Y4C4 1052 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PCDHB4Q9Y5E5 795 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 A0A0A0MRY4 1105 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 GABARAPO95166 117 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 NDST3O95803 873 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 KRT3P12035 628 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MRPS22P82650 360 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FOXM1Q08050 763 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TAF12Q16514 161 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SMTNL2Q2TAL5 461 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SLC39A12Q504Y0 691 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TJAP1Q5JTD0 557 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CFAP157Q5JU67 520 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 NEK10Q6ZWH5 1172 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 OR8H2Q8N162 312 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PPHLN1Q8NEY8 458 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 DEPDC1BQ8WUY9 529 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 RSAD2Q8WXG1 361 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SMG7Q92540 1137 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ROPN1LQ96C74 230 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 RCN3Q96D15 328 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PGAP3Q96FM1 320 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SPATA13Q96N96 652 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF300Q96RE9 604 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MRPL45Q9BRJ2 306 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CXCL16Q9H2A7 254 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SMYD3Q9H7B4 428 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CCSER2Q9H7U1 834 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 WDR41Q9HAD4 459 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ANLNQ9NQW6 1124 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 AGO1Q9UL18 857 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 I3L4J1 428 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NME4O00746 187 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SNX2O60749 519 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ZMPSTE24O75844 475 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 LATS1O95835 1130 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NPR3P17342 541 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 HRH2P25021 359 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TGFBR2P37173 567 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GZMMP51124 257 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 BBS9Q3SYG4 887 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 BTBD8Q5XKL5 378 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 KAZNQ674X7 775 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 LAIR1Q6GTX8 287 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TBPL2Q6SJ96 375 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GSTA5Q7RTV2 222 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ADGRD2Q7Z7M1 963 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ADHFE1Q8IWW8 467 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF557Q8N988 423 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SCAIQ8N9R8 606 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 OR10T2Q8NGX3 314 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SNX19Q92543 992 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ASIC4Q96FT7 647 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TSGA13Q96PP4 275 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SNRNP25Q9BV90 132 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MAGEB5Q9BZ81 275 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GSTO2Q9H4Y5 243 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CERS4Q9HA82 394 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CLEC1BQ9P126 229 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 OSGIN1Q9UJX0 560 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 KIAA1549LQ6ZVL6 1849 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF839A8K0R7 811 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 EIF3FO00303 357 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MSI1O43347 362 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GLP2RO95838 553 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 FGF4P08620 206 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 JUNDP17535 347 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TFEBP19484 476 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CRHBPP24387 322 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MPSTP25325 297 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NOS2P35228 1153 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CCR10P46092 362 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 RPL14P50914 215 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 INAVAQ3KP66 663 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms