RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 FAM69BQ5VUD6 431 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 PGBD5Q8N414 524 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 UBE2Q2Q8WVN8 375 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 ZDHHC12Q96GR4 267 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 MCEEQ96PE7 176 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 NUDCD1Q96RS6 583 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 RUBCNLQ9H714 662 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
CLDND1-227ENST00000513452 SNX7Q9UNH6 387 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 AP4E1Q9UPM8 1137 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 NTNG1Q9Y2I2 539 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 COPG1Q9Y678 874 aaKnown RBP10.33□□□□□ -0.76
CLDND1-227ENST00000513452 ZFHX3Q15911 3703 aa10.33□□□□□ -0.76
CLDND1-227ENST00000513452 IGHV5-51A0A0C4DH38 117 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ANKRD62A6NC57 917 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 GRID2O43424 1007 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CPNE3O75131 537 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CHRNB2P17787 502 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ERCC2P18074 760 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 XRCC1P18887 633 aaPredicted RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 HSPA9P38646 679 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 SLC19A1P41440 591 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 NSFP46459 744 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 VAV2P52735 878 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 STC1P52823 247 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CDR2Q01850 454 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 PTSQ03393 145 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 PTP4A2Q12974 167 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 GPS2Q13227 327 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ATP1A4Q13733 1029 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 MAN2A1Q16706 1144 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CA9Q16790 459 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 KLHDC7AQ5VTJ3 777 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 RFX8Q6ZV50 586 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 MED25Q71SY5 747 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF677Q86XU0 584 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 TMEM126BQ8IUX1 230 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ENDOVQ8N8Q3 282 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 GLIS1Q8NBF1 620 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 C3orf20Q8ND61 904 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 PIH1D2Q8WWB5 315 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 INPP5DQ92835 1189 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 LURAP1Q96LR2 239 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 FCRL4Q96PJ5 515 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 MGME1Q9BQP7 344 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 MLPHQ9BV36 600 aaPredicted RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CHST8Q9H2A9 424 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 DHX35Q9H5Z1 703 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 RMI1Q9H9A7 625 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 WASH6PQ9NQA3 447 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 FGF21Q9NSA1 209 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 KLC4Q9NSK0 619 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ADAM22Q9P0K1 906 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF624Q9P2J8 865 aaPredicted RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 RWDD2AQ9UIY3 292 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 CNOT6Q9ULM6 557 aaKnown RBP10.32□□□□□ -0.76
CLDND1-227ENST00000513452 OSGIN2Q9Y236 505 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
CLDND1-227ENST00000513452 DIDO1Q9BTC0 2240 aaKnown RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 POLEQ07864 2286 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 PDZK1P1A8MUH7 402 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 FADS2P1A8MWK0 482 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 SCRG1O75711 98 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 MTA2O94776 668 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 GFPT2O94808 682 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 PDHA1P08559 390 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 UCHL3P15374 230 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF30P17039 623 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 RRADP55042 308 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 GSCP56915 257 aaPredicted RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 RPL7AP62424 266 aaKnown RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 GPR18Q14330 331 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 LYPLAL1Q5VWZ2 237 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 IZUMO3Q5VZ72 239 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 DNAJC24Q6P3W2 148 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 CRTC3Q6UUV7 619 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 CERS6Q6ZMG9 384 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 GDF7Q7Z4P5 450 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ARFGAP1Q8N6T3 406 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 TMEM102Q8N9M5 508 aaPredicted RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ST6GALNAC3Q8NDV1 305 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 UBXN4Q92575 508 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 SGSM3Q96HU1 749 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 SLC41A2Q96JW4 573 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF514Q96K75 400 aaPredicted RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF599Q96NL3 588 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
CLDND1-227ENST00000513452 CNPY3Q9BT09 278 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 VPS16Q9H269 839 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 NDST4Q9H3R1 872 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 ARFGAP3Q9NP61 516 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 POT1Q9NUX5 634 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 C5AR2Q9P296 337 aa10.31□□□□□ -0.76
CLDND1-227ENST00000513452 DNAJC16Q9Y2G8 782 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms