RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 VWA5B1Q5TIE3 1220 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 SLC34A3Q8N130 599 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 FLCNQ8NFG4 579 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 PNPT1Q8TCS8 783 aaKnown RBP12.4□□□□□ -0.43
COL11A1-210ENST00000512756 GULP1Q9UBP9 304 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 U3KQV3 271 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ADH1CP00326 375 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 GABRR2P28476 465 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CDH4P55283 916 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 KCTD19Q17RG1 926 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ATG14Q6ZNE5 492 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SLC24A5Q71RS6 500 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 UNC5BQ8IZJ1 945 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SVOPLQ8N434 492 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 TIMM22Q9Y584 194 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SAGE2PA6NJ88 616 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 LOC110117498-PIK3R3F6TDL0 507 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 PRPS2P11908 318 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 PNLIPRP1P54315 467 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 NRG1Q02297 640 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SP3Q02447 781 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CCNIQ14094 377 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 POM121L1PQ3SYA9 428 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 UBR7Q8N806 425 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF781Q8N8C0 355 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SCAIQ8N9R8 606 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF248Q8NDW4 579 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 C12orf65Q9H3J6 166 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 TBC1D14Q9P2M4 693 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 NR2E1Q9Y466 385 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 IRAK3Q9Y616 596 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 H3BM21 787 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 FPGTO14772 594 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 KELP23276 732 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 DSC2Q02487 901 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 C6orf52Q5T4I8 152 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF554Q86TJ5 538 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 GPR152Q8TDT2 470 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 DNAJC1Q96KC8 554 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SNX27Q96L92 541 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 N6AMT1Q9Y5N5 214 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 MYOM1P52179 1685 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 AREL1O15033 823 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CHST10O43529 356 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 MPZL2O60487 215 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SLC25A12O75746 678 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ITPKAP23677 461 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 GNA12Q03113 381 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 LAPTM5Q13571 262 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CBR4Q8N4T8 237 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
COL11A1-210ENST00000512756 CLHC1Q8NHS4 586 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 PIGUQ9H490 435 aa12.39□□□□□ -0.43
COL11A1-210ENST00000512756 ERN1O75460 977 aaKnown RBP12.38□□□□□ -0.43
COL11A1-210ENST00000512756 GLUD2P49448 558 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 IL10RBQ08334 325 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 FSTL1Q12841 308 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 HKDC1Q2TB90 917 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 GCNT6Q5T4J0 391 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-210ENST00000512756 C11orf65Q8NCR3 313 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 PCDH19Q8TAB3 1148 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 NAT14Q8WUY8 206 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 TMEM138Q9NPI0 162 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 SEC14L3Q9UDX4 400 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 ANGPTL1O95841 491 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 FADS2O95864 444 aaKnown RBP12.38□□□□□ -0.43
COL11A1-210ENST00000512756 ESR1P03372 595 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 AP1S1P61966 158 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 SULT1C3Q6IMI6 304 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 TMPRSS11AQ6ZMR5 421 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 FSTL5Q8N475 847 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-210ENST00000512756 AP2M1Q96CW1 435 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
COL11A1-210ENST00000512756 FBXW11Q9UKB1 542 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
COL11A1-210ENST00000512756 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms