RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MMABQ96EY8 250 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 KLHDC7BQ96G42 594 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MTG1Q9BT17 334 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 HRH4Q9H3N8 390 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ACTR8Q9H981 624 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MRM3Q9HC36 420 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SENP1Q9P0U3 644 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYTH4Q9UIA0 394 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAGEL2Q9UJ55 1249 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 NIP7Q9Y221 180 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PCDHB6Q9Y5E3 794 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 POLR3AO14802 1390 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 NKTRP30414 1462 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ANKARQ7Z5J8 1434 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 A0A0U1RQJ8 604 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 EDDM13A0A1B0GTR0 161 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SH3D21A4FU49 640 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CGB1A6NKQ9 187 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TEX22C9J3V5 150 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 K7EQM0 130 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 IGF2BP3O00425 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 LSM1O15116 133 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 GRM6O15303 877 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 DCXO43602 365 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 KLK8O60259 260 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZWINTO95229 277 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RPA2P15927 270 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 UGT1A6P19224 532 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TCN1P20061 433 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ATP6V1C1P21283 382 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TKTP29401 623 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CSTF2P33240 577 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 GALCP54803 685 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ANTXR2P58335 489 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPX6P59796 221 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC44A4Q53GD3 710 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RARS2Q5T160 578 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PIP5KL1Q5T9C9 394 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RNASEH2BQ5TBB1 312 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 NAA35Q5VZE5 725 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM91A1Q658Y4 838 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMEM53Q6P2H8 277 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 HJURPQ8NCD3 748 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 WNT2BQ93097 391 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SAAL1Q96ER3 474 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 EEF2KMTQ96G04 330 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PPP1R10Q96QC0 940 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PANX3Q96QZ0 392 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF607Q96SK3 696 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYTH2Q99418 400 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CDADC1Q9BWV3 514 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 IMPG2Q9BZV3 1241 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TTYH3Q9C0H2 523 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 LSG1Q9H089 658 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 FBXO44Q9H4M3 255 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF275Q9NSD4 429 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 AP5S1Q9NUS5 200 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 VPS51Q9UID3 782 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC9A8Q9Y2E8 581 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 BTBD3Q9Y2F9 522 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SRPRBQ9Y5M8 271 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SNX14Q9Y5W7 946 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 COPG1Q9Y678 874 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 NRKQ7Z2Y5 1582 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ERICH2A1L162 156 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRAMEF22A3QJZ6 481 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SPECC1L-ADORA2AF8WAN1 911 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 LINC01387J3KSC0 135 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ACOT7O00154 380 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRRG1O14668 218 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF197O14709 1029 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ALOX15BO15296 676 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 DFNA5O60443 496 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ENO1P06733 434 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CRYGCP07315 174 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 IGFBP1P08833 259 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM157BP0CG42 384 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRPS2P11908 318 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ATP5JP18859 108 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYP2B6P20813 491 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MGAT1P26572 445 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SERPINH1P50454 418 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CDH13P55290 713 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 EIF3BP55884 814 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CLDN8P56748 225 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SCARF1Q14162 830 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 DCST1Q5T197 706 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRAMEF18Q5VWM3 479 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SASS6Q6UVJ0 657 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 KCTD1Q719H9 257 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CHERPQ8IWX8 916 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 C12orf56Q8IXR9 622 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPR65Q8IYL9 337 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CFAP206Q8IYR0 622 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF248Q8NDW4 579 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms