RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 RUFY1Q96T51 708 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 CARD9Q9H257 536 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 KLC4Q9NSK0 619 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 PCYT1BQ9Y5K3 369 aaPredicted RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 SLC30A1Q9Y6M5 507 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 FBN2P35556 2912 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 A6NL46 340 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 PDZK1P1A8MUH7 402 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 NUAK1O60285 661 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 MTA2O94776 668 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 TIAF1O95411 115 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 KLK3P07288 261 aaPredicted RBP12.37□□□□□ -0.43
DDX41-215ENST00000512431 SLC19A1P41440 591 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 CAPZBP47756 277 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 RRADP55042 308 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 ITGA1P56199 1179 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 MAXP61244 160 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 CDK18Q07002 472 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 ITKQ08881 620 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 MED25Q71SY5 747 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 RBM12BQ8IXT5 1001 aaKnown RBP12.37□□□□□ -0.43
DDX41-215ENST00000512431 PGBD5Q8N414 524 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 CISD2Q8N5K1 135 aaKnown RBP12.37□□□□□ -0.43
DDX41-215ENST00000512431 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
DDX41-215ENST00000512431 TMEM102Q8N9M5 508 aaPredicted RBP12.37□□□□□ -0.43
DDX41-215ENST00000512431 MLKLQ8NB16 471 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 UBXN4Q92575 508 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 MR1Q95460 341 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 WASH6PQ9NQA3 447 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 POT1Q9NUX5 634 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 PCSK1NQ9UHG2 260 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 SNX7Q9UNH6 387 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 ENTPD4Q9Y227 616 aa12.37□□□□□ -0.43
DDX41-215ENST00000512431 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 SHANK1Q9Y566 2161 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 A0A0J9YYE9 177 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 RNF8O76064 485 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 TRBC1P01850 177 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 PDHA1P08559 390 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 PSMA2P25787 234 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 MMP13P45452 471 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 HCAR3P49019 387 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 STC1P52823 247 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 POLR2FP61218 127 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 CA9Q16790 459 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 INSCQ1MX18 579 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 HSP90AA4PQ58FG1 418 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 LYPLAL1Q5VWZ2 237 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 ARFGAP1Q8N6T3 406 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 FAM83DQ9H4H8 585 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 AKIRIN1Q9H9L7 192 aaPredicted RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 C5AR2Q9P296 337 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 EPHA6Q9UF33 1036 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 B3GNT3Q9Y2A9 372 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
DDX41-215ENST00000512431 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
DDX41-215ENST00000512431 TCRBV5S1A1TA0A578 114 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 PRPSAP2O60256 369 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 SCRG1O75711 98 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 CLDN7O95471 211 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 PEX11BO96011 259 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 FOLR1P15328 257 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 CA4P22748 312 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 GRNP28799 593 aaKnown RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 VAV2P52735 878 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 CDH6P55285 790 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 SEPT7Q16181 437 aaKnown RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 PLEKHN1Q494U1 663 aaPredicted RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 KLHL35Q6PF15 583 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 TMCO3Q6UWJ1 677 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 TMEM126BQ8IUX1 230 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 PSTKQ8IV42 348 aaKnown RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 ATPAF2Q8N5M1 289 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 GLIS1Q8NBF1 620 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 SGSM3Q96HU1 749 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 ZNF514Q96K75 400 aaPredicted RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 SMAD5Q99717 465 aaKnown RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
DDX41-215ENST00000512431 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
DDX41-215ENST00000512431 NT5MQ9NPB1 228 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms