RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RHOCP08134 193 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 IDH2P48735 452 aaKnown RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 POLD2P49005 469 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CDKN2DP55273 166 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 UBE3AQ05086 875 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 TGFBIQ15582 683 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CCDC85BQ15834 202 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 ZNF621Q6ZSS3 439 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ADAM2Q99965 735 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 IMPAD1Q9NX62 359 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 MAGEL2Q9UJ55 1249 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.78□□□□□ -0.04
USP38-202ENST00000510377 PDE10AQ9Y233 779 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 VPS9D1Q9Y2B5 631 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 GMPPBQ9Y5P6 360 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 SLX4Q8IY92 1834 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 MFN2O95140 757 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 ABCB1P08183 1280 aaPredicted RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 SH3BP2P78314 561 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 BRMS1LQ5PSV4 323 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 IQSEC1Q6DN90 963 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 RTL3Q8N8U3 475 aaKnown RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 SIDT2Q8NBJ9 832 aaKnown RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 ZNF597Q96LX8 424 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 TSSK3Q96PN8 268 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 TPRKBQ9Y3C4 175 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 DNAJC15Q9Y5T4 150 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 ANKRD33BA6NCL7 494 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 IRAK2O43187 625 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 CTPS1P17812 591 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 S100A3P33764 101 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 INPP1P49441 399 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 FOXA1P55317 472 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 ZNF829Q3KNS6 432 aaPredicted RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 UNC50Q53HI1 259 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 NKAPQ8N5F7 415 aaKnown RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 ZBTB8BQ8NAP8 495 aaPredicted RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 ATAD1Q8NBU5 361 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 SPPL2AQ8TCT8 520 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 NODALQ96S42 347 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 SH3GL1Q99961 368 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 FAM124BQ9H5Z6 455 aaPredicted RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 INTS7Q9NVH2 962 aaKnown RBP14.77□□□□□ -0.04
USP38-202ENST00000510377 PCDHGC4Q9Y5F7 938 aa14.77□□□□□ -0.04
USP38-202ENST00000510377 ACOT8O14734 319 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 SLC7A4O43246 635 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 NIPSNAP2O75323 286 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 RPP40O75818 363 aaKnown RBP14.77□□□□□ -0.05
USP38-202ENST00000510377 GRK4P32298 578 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 NOGQ13253 232 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 ZNF846Q147U1 533 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 RSBN1Q5VWQ0 802 aaPredicted RBP14.77□□□□□ -0.05
USP38-202ENST00000510377 UGT3A1Q6NUS8 523 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 OR8H2Q8N162 312 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 OR6K2Q8NGY2 324 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 OR52E6Q96RD3 313 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 UBA2Q9UBT2 640 aaPredicted RBP14.77□□□□□ -0.05
USP38-202ENST00000510377 EVPLQ92817 2033 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 COL1A2P08123 1366 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 TMEM88BA6NKF7 163 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 CLDN25C9JDP6 229 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 ATE1O95260 518 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 PRSS56P0CW18 603 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 CD52P31358 61 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 MC4RP32245 332 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 PFKPQ01813 784 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 INAQ16352 499 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 SIRPB2Q5JXA9 342 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 GPR142Q7Z601 462 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 CILP2Q8IUL8 1156 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 HS6ST3Q8IZP7 471 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 TAGAPQ8N103 731 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 TM6SF2Q9BZW4 377 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 NDEL1Q9GZM8 345 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 GDAP2Q9NXN4 497 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 OPTCQ9UBM4 332 aa14.77□□□□□ -0.05
USP38-202ENST00000510377 RAD51BO15315 384 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 IMPDH2P12268 514 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ZNF12P17014 697 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 FMO3P31513 532 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 HSPA7P48741 367 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 CRYBB1P53674 252 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 LRP8Q14114 963 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 DAG1Q14118 895 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 TRIP4Q15650 581 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 C11orf74Q86VG3 221 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 PROSER1Q86XN7 944 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 SLC44A2Q8IWA5 706 aaPredicted RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 OR7D4Q8NG98 312 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 FAM110BQ8TC76 370 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 PNPT1Q8TCS8 783 aaKnown RBP14.76□□□□□ -0.05
USP38-202ENST00000510377 ZHX1-C8orf76Q96EF9 292 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 C16orf70Q9BSU1 422 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 OSBPL2Q9H1P3 480 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 USE1Q9NZ43 259 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 GMIPQ9P107 970 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 SMIM35A0A1B0GVV1 85 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ECI2O75521 394 aa14.76□□□□□ -0.05
USP38-202ENST00000510377 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms