RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 DDX60Q8IY21 1712 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 C1orf226A1L170 272 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 WDR91A4D1P6 747 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SYNDIG1LA6NDD5 238 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 BECN2A8MW95 431 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 MS4A18H0YCH9 400 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 VCYO14598 125 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ITM2AO43736 263 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 NEMFO60524 1076 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ERAL1O75616 437 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 TPPPO94811 219 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 NDUFB4O95168 129 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 PGM3O95394 542 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CYP1A2P05177 515 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CYC1P08574 325 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 G6PDP11413 515 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ARSBP15848 533 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SAT1P21673 171 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CHATP28329 748 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC15A1P46059 708 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ENTPD1P49961 510 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 RASSF2P50749 326 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 MFAP4P55083 255 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SRSF1Q07955 248 aaKnown RBP eCLIP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ACSM2AQ08AH3 577 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ST3GAL1Q11201 340 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 LRMPQ12912 555 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 TRAF1Q13077 416 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ETFDHQ16134 617 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF284Q2VY69 593 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 LRIF1Q5T3J3 769 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ACSM2BQ68CK6 577 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 JADE1Q6IE81 842 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZSCAN25Q6NSZ9 544 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ANKRD54Q6NXT1 300 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 COLCA1Q6ZS62 124 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SEPT14Q6ZU15 432 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CCDC186Q7Z3E2 898 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 UNC5CLQ8IV45 518 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 KRT222Q8N1A0 295 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SCML4Q8N228 414 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 POC5Q8NA72 575 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SPC24Q8NBT2 197 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 HJURPQ8NCD3 748 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CCDC112Q8NEF3 446 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 AGBL3Q8NEM8 1001 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 RPL36ALQ969Q0 106 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 RRNAD1Q96FB5 475 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ERO1AQ96HE7 468 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 PPP1R13BQ96KQ4 1090 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 HARBI1Q96MB7 349 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 OR2A14Q96R47 310 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 KRTAP4-5Q9BYR2 181 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 TM6SF1Q9BZW5 370 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 IL25Q9H293 177 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CLSTN2Q9H4D0 955 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLITRK6Q9H5Y7 841 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CATSPERBQ9H7T0 1116 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CLK4Q9HAZ1 481 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 MKKSQ9NPJ1 570 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 HINT3Q9NQE9 182 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 HYPKQ9NX55 129 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 OR6C3Q9NZP0 311 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 STK26Q9P289 416 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 CHORDC1Q9UHD1 332 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 RCOR1Q9UKL0 485 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 EXOC6BQ9Y2D4 811 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SRPRBQ9Y5M8 271 aaKnown RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 RAI2Q9Y5P3 530 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 STON1Q9Y6Q2 735 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 KDRP35968 1356 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 LMO7Q8WWI1 1683 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLIT1O75093 1534 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 NPHP4O75161 1426 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 ADCY9O60503 1353 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 VPS37CA5D8V6 355 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 J3KR12 359 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 TULP2O00295 520 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 PLOD3O60568 738 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 ENTPD3O75355 529 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 JRKO75564 520 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 CAVIN2O95810 425 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 DNTTP04053 509 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 TUBBP07437 444 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 SRPRAP08240 638 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 FGF2P09038 288 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 SELLP14151 372 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 H2AFXP16104 143 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 NAGAP17050 411 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 CD58P19256 250 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 TNFRSF1BP20333 461 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 GNLYP22749 145 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 GJB2P29033 226 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 EIF2S3P41091 472 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 RFX5P48382 616 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 NRIP1P48552 1158 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZP1P60852 638 aa3.18□□□□□ -1.9
CALCOCO2-216ENST00000509784 CCZ1BP86790 482 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms