RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 C11orf96Q7Z7L8 435 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 SLC9B2Q86UD5 537 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 NDUFAF2Q8N183 169 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 PLD5Q8N7P1 536 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 GALNT6Q8NCL4 622 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 RSC1A1Q92681 617 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 CATSPER2Q96P56 530 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 HERPUD2Q9BSE4 406 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 MLPHQ9BV36 600 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-202ENST00000509637 RMI1Q9H9A7 625 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 RPL26L1Q9UNX3 145 aaKnown RBP15.69■□□□□ 0.1
RAB40C-202ENST00000509637 WDR37Q9Y2I8 494 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 SPO11Q9Y5K1 396 aa15.69■□□□□ 0.1
RAB40C-202ENST00000509637 KIR2DS5A0A0G2JLQ3 304 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 A0A0G2JNG1 304 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 C3orf70A6NLC5 250 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 KIR2DS3K7RE56 304 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CAPN5O15484 640 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 MTSS1O43312 755 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 PROSCO94903 275 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 PYGLP06737 847 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CES1P23141 567 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 SSR1P43307 286 aaKnown RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 PPM1FP49593 454 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 KIR2DS5Q14953 304 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 TDRD12Q587J7 1177 aaKnown RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 ALKBH5Q6P6C2 394 aaKnown RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 NPNTQ6UXI9 565 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CERS6Q6ZMG9 384 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 RAVER1Q8IY67 606 aaKnown RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CCDC13Q8IYE1 715 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CPLX3Q8WVH0 158 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 APOBEC4Q8WW27 367 aaKnown RBP15.68■□□□□ 0.1
RAB40C-202ENST00000509637 MIB2Q96AX9 1013 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 HDAC11Q96DB2 347 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 ELMO2Q96JJ3 720 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 TGM7Q96PF1 710 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 ZNF670Q9BS34 389 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 ZMYND15Q9H091 742 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 TRIM39Q9HCM9 518 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 AMACRQ9UHK6 382 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 ANAPC2Q9UJX6 822 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 CROTQ9UKG9 612 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 MAN2B2Q9Y2E5 1009 aa15.68■□□□□ 0.1
RAB40C-202ENST00000509637 SPENQ96T58 3664 aaKnown RBP15.67■□□□□ 0.1
RAB40C-202ENST00000509637 OR52A4PA6NMU1 304 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 MYO1FO00160 1098 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 BPIP17213 487 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 TCN2P20062 427 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 KDELR1P24390 212 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 IFI35P80217 286 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-202ENST00000509637 NOMO1Q15155 1222 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 TIGD7Q6NT04 549 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-202ENST00000509637 LURAP1LQ8IV03 231 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 KCTD6Q8NC69 237 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 SPATA22Q8NHS9 363 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 SYN2Q92777 582 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-202ENST00000509637 SH3KBP1Q96B97 665 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 RNF157Q96PX1 679 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 PSMG3-AS1Q96PY0 264 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 OR6C1Q96RD1 312 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 ZPBPQ9BS86 351 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 SPATA16Q9BXB7 569 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 UCK1Q9HA47 277 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 PKD2L2Q9NZM6 624 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 DNAJC16Q9Y2G8 782 aa15.67■□□□□ 0.1
RAB40C-202ENST00000509637 A0A1W2PQJ5 194 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 GPR39O43194 453 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 KIAA0754O94854 1291 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 UBXN7O94888 489 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 SLC25A14O95258 325 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 SERPING1P05155 500 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ZNF7P17097 686 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 RPL10P27635 214 aaKnown RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 DLSTP36957 453 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 MLLT10P55197 1068 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 FANCCQ00597 558 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 FOXM1Q08050 763 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 PPIDQ08752 370 aaKnown RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 MAP7Q14244 749 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ERV3-1Q14264 604 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 SEPT7Q16181 437 aaKnown RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 FILIP1LQ4L180 1135 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 CRTC2Q53ET0 693 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ABRAXAS1Q6UWZ7 409 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 CCNYQ8ND76 341 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 KLHL6Q8WZ60 621 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 GLYATL1Q969I3 302 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 IMP4Q96G21 291 aaKnown RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 TRIM55Q9BYV6 548 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ULBP3Q9BZM4 244 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 OSGEPL1Q9H4B0 414 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ZFYVE1Q9HBF4 777 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 TRIM10Q9UDY6 481 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 CAPN11Q9UMQ6 739 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 ICE1Q9Y2F5 2266 aa15.66■□□□□ 0.1
RAB40C-202ENST00000509637 USP9XQ93008 2570 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-202ENST00000509637 SPTBP11277 2137 aa15.65■□□□□ 0.1
RAB40C-202ENST00000509637 LRRK2Q5S007 2527 aa15.65■□□□□ 0.1
RAB40C-202ENST00000509637 RGSL1A5PLK6 1076 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms