RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 BIRC2Q13490 618 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 NR0B2Q15466 257 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CCDC38Q502W7 563 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 PYCR3Q53H96 274 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 FASTKD1Q53R41 847 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 ZRANB3Q5FWF4 1079 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CERCAMQ5T4B2 595 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GPRC6AQ5T6X5 926 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 RNASEH2BQ5TBB1 312 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 PSAPL1Q6NUJ1 521 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 ERMP1Q7Z2K6 904 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 KANSL1Q7Z3B3 1105 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TRIM74Q86UV6 250 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 LRRTM4Q86VH4 590 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TRAPPC5Q8IUR0 188 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CCNJLQ8IV13 435 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 RBFAQ8N0V3 343 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 PELI3Q8N2H9 469 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 NXPE1Q8N323 547 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 MPP5Q8N3R9 675 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 SLC25A45Q8N413 288 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 EID2Q8N6I1 236 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CEP112Q8N8E3 955 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 ARL10Q8N8L6 244 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 NAT8LQ8N9F0 302 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 DEFB124Q8NES8 71 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 OR13C4Q8NGS5 318 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CDKN2AIPNLQ96HQ2 116 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CNDP2Q96KP4 475 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 SERPINB12Q96P63 405 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 COPS8Q99627 209 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TIMM29Q9BSF4 260 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 KIFC1Q9BW19 673 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TSSK1BQ9BXA7 367 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 OR2AG1Q9H205 316 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 STN1Q9H668 368 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 PIH1D1Q9NWS0 290 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 ATXN10Q9UBB4 475 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 KLF15Q9UIH9 416 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 CNOT6Q9ULM6 557 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 SOX13Q9UN79 622 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GPR34Q9UPC5 381 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TMEM98Q9Y2Y6 226 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 PCDHGA1Q9Y5H4 931 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 DNMT3AQ9Y6K1 912 aaPredicted RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 GOLGA4Q13439 2230 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 LRP4O75096 1905 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 FAM237BA0A1B0GVD1 139 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 AGAP14A8MT82 685 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CHUKO15111 745 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 DNAJC6O75061 913 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 AP2A2O94973 939 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 SEC31AO94979 1220 aaKnown RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 KCNK5O95279 499 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 GP1BAP07359 652 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CKMT1AP12532 417 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ZNF8P17098 575 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 CKMT2P17540 419 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ACRV1P26436 265 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 MGAT1P26572 445 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 PMLP29590 882 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 GRIA1P42261 906 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 PTGIRP43119 386 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 TTPAP49638 278 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CLCNKAP51800 687 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 TERF1P54274 439 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ARL4CP56559 192 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 SIM1P81133 766 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 XIAPP98170 497 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CAV1Q03135 178 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 C2orf54Q08AI8 447 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ITIH4Q14624 930 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 INSCQ1MX18 579 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 DEFB133Q30KQ1 61 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 PPM1JQ5JR12 505 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 RNF187Q5TA31 235 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 MRNIPQ6NTE8 343 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 C8orf74Q6P047 294 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ZNF449Q6P9G9 518 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 MARK2Q7KZI7 788 aaKnown RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 TAS2R42Q7RTR8 314 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 ADGRG6Q86SQ4 1221 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 SDCCAG8Q86SQ7 713 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 FAM46DQ8NEK8 389 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 OR6P1Q8NGX9 317 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 OR4L1Q8NH43 312 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 WDR48Q8TAF3 677 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 BAHD1Q8TBE0 780 aaPredicted RBP9.03□□□□□ -0.96
NUP54-207ENST00000508583 CALML6Q8TD86 181 aa9.03□□□□□ -0.96
NUP54-207ENST00000508583 HDAC10Q969S8 669 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms