RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 KLHDC8BQ8IXV7 354 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 TRIM58Q8NG06 486 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 SLC37A2Q8TED4 501 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 LRRC45Q96CN5 670 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 TLR10Q9BXR5 811 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 OSGEPL1Q9H4B0 414 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 POLR1BQ9H9Y6 1135 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.83■■□□□ 1.41
SRPK1-210ENST00000508473 SLC23A2Q9UGH3 650 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 FKBPLQ9UIM3 349 aa23.83■■□□□ 1.41
SRPK1-210ENST00000508473 COL27A1Q8IZC6 1860 aaPredicted RBP23.83■■□□□ 1.4
SRPK1-210ENST00000508473 SCN8AQ9UQD0 1980 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 PMS2P1A4D2B8 440 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 GPR89AB7ZAQ6 455 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 AGRPO00253 132 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 GAPDHSO14556 408 aaPredicted RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 CHUKO15111 745 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 TLX3O43711 291 aaPredicted RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 VEGFDO43915 354 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 GPR89BP0CG08 455 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 TPH1P17752 444 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 TMPRSS15P98073 1019 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 TMEM115Q12893 351 aaPredicted RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 INSCQ1MX18 579 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 P3H1Q32P28 736 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF438Q7Z4V0 828 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 LRRTM4Q86VH4 590 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF761Q86XN6 746 aaPredicted RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 OR13C4Q8NGS5 318 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 BRSK1Q8TDC3 778 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 DCBLD2Q96PD2 775 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 FRMD8P1Q9BZ68 369 aaPredicted RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 LRRC40Q9H9A6 602 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 EPB41L5Q9HCM4 733 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 PRDM8Q9NQV8 689 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 PIH1D1Q9NWS0 290 aaKnown RBP23.82■■□□□ 1.4
SRPK1-210ENST00000508473 DNAJC16Q9Y2G8 782 aa23.82■■□□□ 1.4
SRPK1-210ENST00000508473 WDFY3Q8IZQ1 3526 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 KMT2BQ9UMN6 2715 aaPredicted RBP23.81■■□□□ 1.4
SRPK1-210ENST00000508473 PPFIA2O75334 1257 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 CRTAMO95727 393 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 ETS1P14921 441 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 STIP1P31948 543 aaKnown RBP23.81■■□□□ 1.4
SRPK1-210ENST00000508473 LSSP48449 732 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 INHBCP55103 352 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 GTF2H3Q13889 308 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 SIX1Q15475 284 aaPredicted RBP23.81■■□□□ 1.4
SRPK1-210ENST00000508473 USP53Q70EK8 1073 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 TMPRSS9Q7Z410 1059 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF547Q8IVP9 402 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 SFRP1Q8N474 314 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF398Q8TD17 642 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 DTX3LQ8TDB6 740 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 GRAMD1AQ96CP6 724 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 RTP4Q96DX8 246 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 TTC25Q96NG3 672 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 RDH14Q9HBH5 336 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 ARNT2Q9HBZ2 717 aa23.81■■□□□ 1.4
SRPK1-210ENST00000508473 KMOO15229 486 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 CEP104O60308 925 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 PRAMEF1O95521 474 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF7P17097 686 aaPredicted RBP23.8■■□□□ 1.4
SRPK1-210ENST00000508473 CXCR5P32302 372 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 ITGA9Q13797 1035 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 MAP9Q49MG5 647 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 GPRC6AQ5T6X5 926 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 NKAIN2Q5VXU1 208 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 IYDQ6PHW0 289 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 C19orf48Q6RUI8 117 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 TRAPPC5Q8IUR0 188 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 FEZ2Q9UHY8 353 aaPredicted RBP23.8■■□□□ 1.4
SRPK1-210ENST00000508473 FREM2Q5SZK8 3169 aa23.8■■□□□ 1.4
SRPK1-210ENST00000508473 URB1O60287 2271 aaKnown RBP23.8■■□□□ 1.4
SRPK1-210ENST00000508473 CCDC187A0A096LP49 1063 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 A6NCN8 305 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 CCL22O00626 93 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 PSMD3O43242 534 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 AP2A1O95782 977 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 FGGP02679 453 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 ACTN2P35609 894 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 ZNF140P52738 457 aaPredicted RBP23.79■■□□□ 1.4
SRPK1-210ENST00000508473 NR1D2Q14995 579 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 TBC1D25Q3MII6 688 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 LDLRAP1Q5SW96 308 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 MICALCLQ6ZW33 695 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 RASGEF1AQ8N9B8 481 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 WDR36Q8NI36 951 aaKnown RBP23.79■■□□□ 1.4
SRPK1-210ENST00000508473 HNRNPLLQ8WVV9 542 aaKnown RBP23.79■■□□□ 1.4
SRPK1-210ENST00000508473 TMEM74Q96NL1 305 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 ASB8Q9H765 288 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 ETNK1Q9HBU6 452 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 UNC13CQ8NB66 2214 aa23.79■■□□□ 1.4
SRPK1-210ENST00000508473 LDB2O43679 373 aa23.78■■□□□ 1.4
SRPK1-210ENST00000508473 SRP72O76094 671 aaKnown RBP23.78■■□□□ 1.4
SRPK1-210ENST00000508473 F3P13726 295 aa23.78■■□□□ 1.4
SRPK1-210ENST00000508473 GPR3P46089 330 aa23.78■■□□□ 1.4
SRPK1-210ENST00000508473 PPM1FP49593 454 aaPredicted RBP23.78■■□□□ 1.4
SRPK1-210ENST00000508473 CTSCP53634 463 aa23.78■■□□□ 1.4
SRPK1-210ENST00000508473 NFATC2Q13469 925 aa23.78■■□□□ 1.4
SRPK1-210ENST00000508473 SEPT6Q14141 434 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms