RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ATXN7L3BQ96GX2 97 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 TRIB3Q96RU7 358 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 PAIP2Q9BPZ3 127 aaKnown RBP10.93□□□□□ -0.66
PROM1-207ENST00000508167 HDAC8Q9BY41 377 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 FAM96AQ9H5X1 160 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 IARS2Q9NSE4 1012 aaKnown RBP10.93□□□□□ -0.66
PROM1-207ENST00000508167 PCMTD2Q9NV79 361 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 SLC2A6Q9UGQ3 507 aa10.93□□□□□ -0.66
PROM1-207ENST00000508167 NUMA1Q14980 2115 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 TECTAO75443 2155 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 SHISA7A6NL88 538 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 TNFRSF10AO00220 468 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 NDUFS3O75489 264 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CBX6O95503 412 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 PCCBP05166 539 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 C6P13671 934 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 OXTRP30559 389 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 MC4RP32245 332 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 FNTBP49356 437 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 LIMK2P53671 638 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 TAF1BQ53T94 588 aaPredicted RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 WLSQ5T9L3 541 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 SCAMP4Q969E2 229 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 ARNT2Q9HBZ2 717 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 FAM8A1Q9UBU6 413 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 APPL1Q9UKG1 709 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 GLYATL1P3A0A0U1RQE8 302 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 CD6P30203 668 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 SPAM1P38567 509 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 SUOXP51687 545 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 RPS21P63220 83 aaKnown RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 MRNIPQ6NTE8 343 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 C16orf46Q6P387 395 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 PRR23BQ6ZRT6 265 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 MTDHQ86UE4 582 aaKnown RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 C1orf210Q8IVY1 113 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 ECHDC3Q96DC8 303 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 ARL8BQ9NVJ2 186 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 FADS3Q9Y5Q0 445 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 FZD6O60353 706 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 DHPSP49366 369 aaPredicted RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 TIAL1Q01085 375 aaKnown RBP eCLIP10.92□□□□□ -0.66
PROM1-207ENST00000508167 SEL1L3Q68CR1 1132 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 DOK6Q6PKX4 331 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 LIPIQ6XZB0 460 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CMC1Q7Z7K0 106 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 KCNMB4Q86W47 210 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 PARP9Q8IXQ6 854 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 GBP7Q8N8V2 638 aaPredicted RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 CLDN23Q96B33 292 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 NUS1Q96E22 293 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 RIOK2Q9BVS4 552 aaKnown RBP10.92□□□□□ -0.66
PROM1-207ENST00000508167 TSSK1BQ9BXA7 367 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 TMEM120AQ9BXJ8 343 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CD93Q9NPY3 652 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CUL9Q8IWT3 2517 aa10.92□□□□□ -0.66
PROM1-207ENST00000508167 CFAP73A6NFT4 308 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 OR51F1A6NGY5 319 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 RPP40O75818 363 aaKnown RBP10.91□□□□□ -0.66
PROM1-207ENST00000508167 PRAMEF1O95521 474 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 DRD3P35462 400 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 SERPINB9P50453 376 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 DLG1Q12959 904 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 HHATQ5VTY9 493 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 ZNF470Q6ECI4 717 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 NEPROQ6NW34 567 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 DPPA4Q7L190 304 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
PROM1-207ENST00000508167 CALML6Q8TD86 181 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 HCAR2Q8TDS4 363 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 CCDC106Q9BWC9 280 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 SGK2Q9HBY8 427 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 FZD3Q9NPG1 666 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 RAD18Q9NS91 495 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 MTO1Q9Y2Z2 717 aaKnown RBP10.91□□□□□ -0.66
PROM1-207ENST00000508167 PLXNB3Q9ULL4 1909 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 KRT37O76014 449 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 HMGCLP35914 325 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 ADPRHP54922 357 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 SLC12A2P55011 1212 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 DBN1Q16643 649 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 PIP5KL1Q5T9C9 394 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 AGBL4Q5VU57 503 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
PROM1-207ENST00000508167 HSD11B1LQ7Z5J1 315 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 HORMAD1Q86X24 394 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 DCLK2Q8N568 766 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 OR2T34Q8NGX1 318 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
PROM1-207ENST00000508167 CDKN2AIPNLQ96HQ2 116 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 HAO1Q9UJM8 370 aa10.91□□□□□ -0.66
PROM1-207ENST00000508167 COPEO14579 308 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms