RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 MBNL1Q9NR56 388 aaKnown RBP17.3■□□□□ 0.36
RNF4-209ENST00000507784 SNX15Q9NRS6 342 aa17.3■□□□□ 0.36
RNF4-209ENST00000507784 SMOXQ9NWM0 555 aa17.3■□□□□ 0.36
RNF4-209ENST00000507784 WSB2Q9NYS7 404 aaPredicted RBP17.3■□□□□ 0.36
RNF4-209ENST00000507784 DLGAP2Q9P1A6 1054 aa17.3■□□□□ 0.36
RNF4-209ENST00000507784 CORO1CQ9ULV4 474 aaPredicted RBP17.3■□□□□ 0.36
RNF4-209ENST00000507784 VWA7Q9Y334 891 aa17.3■□□□□ 0.36
RNF4-209ENST00000507784 PCDHB1Q9Y5F3 818 aa17.3■□□□□ 0.36
RNF4-209ENST00000507784 IGHV1OR15-9A0A0B4J2B8 117 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 AXIN1O15169 862 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 SPAG7O75391 227 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 RFPL1O75677 317 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 ASMTLO95671 621 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 PYGLP06737 847 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 BRAFP15056 766 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 CREB1P16220 341 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 STMN1P16949 149 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 ITGB6P18564 788 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 KRT4P19013 534 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 CHRM3P20309 590 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 TAS2R39P59534 338 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 POU4F1Q01851 419 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 AGERQ15109 404 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 MAP7D1Q3KQU3 841 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 TRIM69Q86WT6 500 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 PHYKPLQ8IUZ5 450 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 FAM160A2Q8N612 972 aaPredicted RBP17.29■□□□□ 0.36
RNF4-209ENST00000507784 HEXDCQ8WVB3 486 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 FAM136AQ96C01 138 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
RNF4-209ENST00000507784 TSPAN17Q96FV3 270 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 P2RY12Q9H244 342 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 C6orf106Q9H6K1 298 aaPredicted RBP17.29■□□□□ 0.36
RNF4-209ENST00000507784 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 SENP1Q9P0U3 644 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 GNPTGQ9UJJ9 305 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 TLK1Q9UKI8 766 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 PRSS21Q9Y6M0 314 aa17.29■□□□□ 0.36
RNF4-209ENST00000507784 E5RI56 91 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 K7ESF4 209 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 RAD51BO15315 384 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 PHGDHO43175 533 aaKnown RBP17.28■□□□□ 0.36
RNF4-209ENST00000507784 ESR1P03372 595 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 ALDOAP04075 364 aaKnown RBP17.28■□□□□ 0.36
RNF4-209ENST00000507784 MPOP05164 745 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 RPS3P23396 243 aaKnown RBP eCLIP17.28■□□□□ 0.36
RNF4-209ENST00000507784 NSG1P42857 185 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 PGGT1BP53609 377 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 INPP5AQ14642 412 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 CTSL3PQ5NE16 218 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 TSSK4Q6SA08 328 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 TRIM74Q86UV6 250 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 DEFB119Q8N690 84 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 ASB12Q8WXK4 309 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 HIC2Q96JB3 615 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 OLFM1Q99784 485 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 SLC13A1Q9BZW2 595 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 SARS2Q9NP81 518 aaKnown RBP17.28■□□□□ 0.36
RNF4-209ENST00000507784 CNOT6Q9ULM6 557 aaKnown RBP17.28■□□□□ 0.36
RNF4-209ENST00000507784 COMMD10Q9Y6G5 202 aa17.28■□□□□ 0.36
RNF4-209ENST00000507784 A0A096LPK6 155 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 IQCF5A8MTL0 148 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 MAP3K13O43283 966 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 LAMTOR5O43504 91 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 NIPSNAP2O75323 286 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 VPS26AO75436 327 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 TRIM16O95361 564 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 SOD1P00441 154 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 OR56A5P0C7T3 313 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 ATP1B2P14415 290 aaPredicted RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 CRABP2P29373 138 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 CDKN2DP55273 166 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 RAB10P61026 200 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 B4GALNT1Q00973 533 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 TMEM115Q12893 351 aaPredicted RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 PDAP1Q13442 181 aaKnown RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 GTF2H3Q13889 308 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 ZNF460Q14592 562 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 TAF1BQ53T94 588 aaPredicted RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 PPM1JQ5JR12 505 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 DOK6Q6PKX4 331 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 ADAMTSL4Q6UY14 1074 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.36
RNF4-209ENST00000507784 HEATR4Q86WZ0 1026 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 CEP97Q8IW35 865 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 DDHD1Q8NEL9 900 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 SNX19Q92543 992 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 CENPTQ96BT3 561 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 CABS1Q96KC9 395 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 SPACA7Q96KW9 195 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 BIRC8Q96P09 236 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 TAS2R13Q9NYV9 303 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 ACTL7BQ9Y614 415 aa17.27■□□□□ 0.36
RNF4-209ENST00000507784 H3BMM5 538 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 COPEO14579 308 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 FPGTO14772 594 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms