RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 C2orf54Q08AI8 447 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 GALNT2Q10471 571 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 RALGDSQ12967 914 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 DPYSL3Q14195 570 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 NFATC4Q14934 902 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TCEAL1Q15170 157 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 IRF4Q15306 451 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PARP6Q2NL67 630 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TIGD7Q6NT04 549 aaPredicted RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ESRP1Q6NXG1 681 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ENPP7Q6UWV6 458 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TRPM8Q7Z2W7 1104 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 NLRP8Q86W28 1048 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 VSIG1Q86XK7 387 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 MARCH9Q86YJ5 346 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 LSMEM2Q8N112 164 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PGBD5Q8N414 524 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ATPAF2Q8N5M1 289 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 KCTD6Q8NC69 237 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 OR6C4Q8NGE1 309 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF564Q8TBZ8 553 aaPredicted RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ACTRT1Q8TDG2 376 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 SEC14L1Q92503 715 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 FAF2Q96CS3 445 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 SCRN2Q96FV2 425 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 BTBD6Q96KE9 485 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 NSMCE3Q96MG7 304 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 CHP1Q99653 195 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF670Q9BS34 389 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ALG2Q9H553 416 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PPANQ9NQ55 473 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 APOBEC3BQ9UH17 382 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PNMA8BQ9ULN7 279 aaPredicted RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PLAAQ9Y263 795 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PCDHGC4Q9Y5F7 938 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PCDHA13Q9Y5I0 950 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 GMEB1Q9Y692 573 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 AK5Q9Y6K8 562 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 U3KQA8 63 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ANKRD36A6QL64 1941 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 APC2O95996 2303 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF487B1APH4 448 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 CACNB4O00305 520 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 MATN3O15232 486 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 FZD6O60353 706 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TCEA3O75764 348 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 MTA2O94776 668 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 AGTP01019 485 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 CYP2A6P11509 494 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 ACADSP16219 412 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 KDELR1P24390 212 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TEAD1P28347 426 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 ALDH3A1P30838 453 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 SOX11P35716 441 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 GARSP41250 739 aaKnown RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 CLCN2P51788 898 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 KIAA1024LP59773 190 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 SRP54P61011 504 aaKnown RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 NR0B2Q15466 257 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 ALG11Q2TAA5 492 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 ATP13A4Q4VNC1 1196 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 LRRC23Q53EV4 343 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 ARMC12Q5T9G4 340 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TTC19Q6DKK2 380 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 ALG1LQ6GMV1 187 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 PNCKQ6P2M8 343 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 GKN2Q86XP6 184 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 RBFAQ8N0V3 343 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 PAF1Q8N7H5 531 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 PLPP7Q8NBV4 271 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 PCDH19Q8TAB3 1148 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 FAM81AQ8TBF8 368 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 IFI44Q8TCB0 444 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 MAPK15Q8TD08 544 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 RAPGEF5Q92565 580 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 MAML1Q92585 1016 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 NAT6Q93015 286 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TLCD1Q96CP7 247 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 COQ10AQ96MF6 247 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 WDR92Q96MX6 357 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 RUNDC3BQ96NL0 473 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 MCCC1Q96RQ3 725 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 RBM15Q96T37 977 aaKnown RBP eCLIP8□□□□□ -1.13
SCN1A-207ENST00000507401 LRRC61Q9BV99 259 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 POLR1EQ9GZS1 481 aaKnown RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 CLPBQ9H078 707 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TCEAL2Q9H3H9 227 aaPredicted RBP8□□□□□ -1.13
SCN1A-207ENST00000507401 EPB41L5Q9HCM4 733 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 TXLNGQ9NUQ3 528 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 INTUQ9ULD6 942 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 PADI4Q9UM07 663 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 RAXQ9Y2V3 346 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 COQ6Q9Y2Z9 468 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 NFS1Q9Y697 457 aa8□□□□□ -1.13
SCN1A-207ENST00000507401 NBEAQ8NFP9 2946 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms