RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 CAPN9O14815 690 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 EIF3DO15371 548 aaKnown RBP eCLIP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 KCNN4O15554 427 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZNHIT1O43257 154 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 KRT36O76013 467 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 IGKV3-20P01619 116 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 TUBBP07437 444 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 GABRB1P18505 474 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 CD53P19397 219 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 CHMP24386 653 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 HRH2P25021 359 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ARCN1P48444 511 aaKnown RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 FMO5P49326 533 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 RPL24P83731 157 aaKnown RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 PPP2R2BQ00005 443 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 GOLGA8DPQ0D2H9 430 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 IRF3Q14653 427 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 DLG2Q15700 870 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 MYLK3Q32MK0 819 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 SOWAHCQ53LP3 525 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 FAM122CQ6P4D5 195 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ANO5Q75V66 913 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 TSPAN33Q86UF1 283 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 EXOC3L1Q86VI1 746 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 TTC39CQ8N584 583 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 MAGEC3Q8TD91 643 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 LRRC8CQ8TDW0 803 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZNF583Q96ND8 569 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 PGLYRP2Q96PD5 576 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 SEPT5Q99719 369 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 LRMDAQ9H2I8 198 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 PLK3Q9H4B4 646 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ABCF3Q9NUQ8 709 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 CWC15Q9P013 229 aaKnown RBP3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZNF69Q9UC07 566 aa3.31□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZCWPW2A0A1B0GU75 182 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 OR5K3A6NET4 321 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 A8MZ25 164 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 P2RY10O00398 339 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 HS3ST1O14792 307 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SYNCRIPO60506 623 aaKnown RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZNF217O75362 1048 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 NDUFS3O75489 264 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 WDHD1O75717 1129 aaPredicted RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 CCNDBP1O95273 360 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 CLTBP09497 229 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FAM106CPP0CH98 169 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 CETPP11597 493 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FGF5P12034 268 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SELLP14151 372 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 POLR2CP19387 275 aaPredicted RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 USP8P40818 1118 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 PRCPP42785 496 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FASLGP48023 281 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 RXRGP48443 463 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SUOXP51687 545 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SREBF2Q12772 1141 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SYT16Q17RD7 645 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZSCAN23Q3MJ62 389 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 TMEM35AQ53FP2 167 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SIRPB2Q5JXA9 342 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 TRNP1Q6NT89 227 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 GDPD4Q6W3E5 623 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 CHST9Q7L1S5 443 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 CCDC190Q86UF4 302 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 AACSQ86V21 672 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 EPHX4Q8IUS5 362 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 PPHLN1Q8NEY8 458 aaKnown RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 GSDMBQ8TAX9 411 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SKA1Q96BD8 255 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FEM1CQ96JP0 617 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 NAP1L4Q99733 375 aaKnown RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 SEMA3CQ99985 751 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 MMP28Q9H239 520 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 KAT14Q9H8E8 782 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 EPB41L5Q9HCM4 733 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 TRPC7Q9HCX4 862 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 BLOC1S4Q9NUP1 217 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 PTTG2Q9NZH5 202 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 MDFICQ9P1T7 246 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FBXL17Q9UF56 701 aa3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 FAF1Q9UNN5 650 aaPredicted RBP3.3□□□□□ -1.88
CDC42SE2-210ENST00000506929 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 A0A0B4J293 547 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 A0A1W2PR77 199 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PRR23AA6NEV1 266 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 TMEM189-UBE2V1I3L0A0 370 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 J3QR06 171 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PLK4O00444 970 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 OGG1O15527 345 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 SLC22A3O75751 556 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 TPPPO94811 219 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 BAIAP3O94812 1187 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 GCNT3O95395 438 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 DDX58O95786 925 aaKnown RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ATP1A1P05023 1023 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms