RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MSH3P20585 1137 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 COILP38432 576 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 SARNPP82979 210 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 TMEM115Q12893 351 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 HLTFQ14527 1009 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNCA-209ENST00000506244 TPSAB1Q15661 275 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 INSCQ1MX18 579 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 GPR33Q49SQ1 333 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 GPRC6AQ5T6X5 926 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 NLRP9Q7RTR0 991 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 PRUNE1Q86TP1 453 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 TRAPPC5Q8IUR0 188 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 AVL9Q8NBF6 648 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 HEXDCQ8WVB3 486 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 CCDC74AQ96AQ1 378 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 ZNF514Q96K75 400 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 DNAJC1Q96KC8 554 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 DEPDC7Q96QD5 511 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 RANBP9Q96S59 729 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 CCDC3Q9BQI4 270 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 STN1Q9H668 368 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 CASS4Q9NQ75 786 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 SPATS2LQ9NUQ6 558 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 RIMKLBQ9ULI2 386 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 KCTD3Q9Y597 815 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 SAR1BQ9Y6B6 198 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A9O60656 530 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 MTX2O75431 263 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 TCEA3O75764 348 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 KRT14P02533 472 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A6P19224 532 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A1P22309 533 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A4P22310 534 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 MC4RP32245 332 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A3P35503 534 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A5P35504 534 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 CLCNKAP51800 687 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 TMPRSS15P98073 1019 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 XIAPP98170 497 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 PTPRCAPQ14761 206 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 CRTC3Q6UUV7 619 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 CCNI2Q6ZMN8 369 aaPredicted RBP16.47■□□□□ 0.23
SNCA-209ENST00000506244 PEX13Q92968 403 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNCA-209ENST00000506244 DCUN1D1Q96GG9 259 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A7Q9HAW7 530 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A10Q9HAW8 530 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 UGT1A8Q9HAW9 530 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 PIH1D1Q9NWS0 290 aaKnown RBP16.47■□□□□ 0.23
SNCA-209ENST00000506244 TMPRSS11EQ9UL52 423 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 PRKAB1Q9Y478 270 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 PTPRBP23467 1997 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 MYLKQ15746 1914 aa16.47■□□□□ 0.23
SNCA-209ENST00000506244 ZFC3H1O60293 1989 aaKnown RBP16.46■□□□□ 0.23
SNCA-209ENST00000506244 KLHL33A6NCF5 533 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 MROH6A6NGR9 719 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 OR5K4A6NMS3 321 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 ZNF185O15231 689 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 GPR39O43194 453 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 KCNJ13O60928 360 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 ECEL1O95672 775 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 ADRA1DP25100 572 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 GPS1Q13098 491 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 SPIDRQ14159 915 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
SNCA-209ENST00000506244 PERM1Q5SV97 790 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 ZNF648Q5T619 568 aaPredicted RBP16.46■□□□□ 0.23
SNCA-209ENST00000506244 C17orf82Q86X59 251 aaPredicted RBP16.46■□□□□ 0.23
SNCA-209ENST00000506244 DCBLD1Q8N8Z6 715 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 RUNDC3BQ96NL0 473 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 IL22Q9GZX6 179 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 OSGEPL1Q9H4B0 414 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 SYNDIG1Q9H7V2 258 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 SMARCAL1Q9NZC9 954 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 BFARQ9NZS9 450 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 RNF14Q9UBS8 474 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 KCNK6Q9Y257 313 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 ST14Q9Y5Y6 855 aa16.46■□□□□ 0.23
SNCA-209ENST00000506244 CEP295Q9C0D2 2601 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 KIR2DS5A0A0G2JLQ3 304 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 A0A0G2JNG1 304 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 TMEM8BA6NDV4 472 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 RHPN2P1A8MT19 583 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 AGAP14A8MT82 685 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 KIR2DS3K7RE56 304 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 MT-CO3P00414 261 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 ZNF7P17097 686 aaPredicted RBP16.45■□□□□ 0.22
SNCA-209ENST00000506244 PSMA3P25788 255 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 PAFAH1B1P43034 410 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 VPS41P49754 854 aa16.45■□□□□ 0.22
SNCA-209ENST00000506244 MAZP56270 477 aaKnown RBP16.45■□□□□ 0.22
SNCA-209ENST00000506244 CACNG1Q06432 222 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms