RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 DBX2Q6ZNG2 339 aa18■□□□□ 0.47
DDR1-254ENST00000504679 MARK2Q7KZI7 788 aaKnown RBP18■□□□□ 0.47
DDR1-254ENST00000504679 ADGRG6Q86SQ4 1221 aa18■□□□□ 0.47
DDR1-254ENST00000504679 TMEM135Q86UB9 458 aa18■□□□□ 0.47
DDR1-254ENST00000504679 NXPE1Q8N323 547 aa18■□□□□ 0.47
DDR1-254ENST00000504679 SDR16C5Q8N3Y7 309 aa18■□□□□ 0.47
DDR1-254ENST00000504679 FSTL5Q8N475 847 aaPredicted RBP18■□□□□ 0.47
DDR1-254ENST00000504679 DDHD1Q8NEL9 900 aa18■□□□□ 0.47
DDR1-254ENST00000504679 LMX1AQ8TE12 382 aa18■□□□□ 0.47
DDR1-254ENST00000504679 ART4Q93070 314 aa18■□□□□ 0.47
DDR1-254ENST00000504679 MFSD3Q96ES6 412 aa18■□□□□ 0.47
DDR1-254ENST00000504679 DCUN1D1Q96GG9 259 aa18■□□□□ 0.47
DDR1-254ENST00000504679 EBNA1BP2Q99848 306 aaKnown RBP18■□□□□ 0.47
DDR1-254ENST00000504679 EPB41L5Q9HCM4 733 aa18■□□□□ 0.47
DDR1-254ENST00000504679 FAM114A2Q9NRY5 505 aa18■□□□□ 0.47
DDR1-254ENST00000504679 GRHL1Q9NZI5 618 aa18■□□□□ 0.47
DDR1-254ENST00000504679 GPSM3Q9Y4H4 160 aa18■□□□□ 0.47
DDR1-254ENST00000504679 CSNK1G3Q9Y6M4 447 aa18■□□□□ 0.47
DDR1-254ENST00000504679 RPS6KL1Q9Y6S9 549 aa18■□□□□ 0.47
DDR1-254ENST00000504679 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 AQP9O43315 295 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 NUAK1O60285 661 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 SDC3O75056 442 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 USP1O94782 785 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 VAPBO95292 243 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 TTC4O95801 387 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 ZNF8P17098 575 aaPredicted RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 AKT1P31749 480 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 GNPDA1P46926 289 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 C1orf61Q13536 156 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 INAVAQ3KP66 663 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 MSS51Q4VC12 460 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 CERS6Q6ZMG9 384 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 CENPUQ71F23 418 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 SERPINA9Q86WD7 417 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 GATAD2AQ86YP4 633 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 GALNT13Q8IUC8 556 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 RBFAQ8N0V3 343 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 SETD7Q8WTS6 366 aaKnown RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 SEC14L1Q92503 715 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 PDXPQ96GD0 296 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 PWWP2AQ96N64 755 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 COPS8Q99627 209 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 TCEAL2Q9H3H9 227 aaPredicted RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 TRNAU1APQ9NX07 287 aaKnown RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 ZDHHC3Q9NYG2 299 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 DMGDHQ9UI17 866 aaKnown RBP17.99■□□□□ 0.47
DDR1-254ENST00000504679 DOLKQ9UPQ8 538 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 CABIN1Q9Y6J0 2220 aa17.99■□□□□ 0.47
DDR1-254ENST00000504679 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 OR51F1A6NGY5 319 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CFAP99D6REC4 459 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 SCAMP1O15126 338 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CD3EAPO15446 510 aaKnown RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 GPR39O43194 453 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 GRID2O43424 1007 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 DNAJC6O75061 913 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 MTX2O75431 263 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CD59P13987 128 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 PGAM1P18669 254 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 ACRV1P26436 265 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CA5AP35218 305 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CDKN1CP49918 316 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 PDIA2Q13087 525 aaKnown RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 CBLBQ13191 982 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 TRADDQ15628 312 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 PYCR3Q53H96 274 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 KIAA0930Q6ICG6 404 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 PSAPL1Q6NUJ1 521 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 SDCCAG8Q86SQ7 713 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 GKN2Q86XP6 184 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 AGGF1Q8N302 714 aaeCLIP17.98■□□□□ 0.47
DDR1-254ENST00000504679 SLC25A45Q8N413 288 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 ZNF548Q8NEK5 533 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 ZNF669Q96BR6 464 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 FCRL3Q96P31 734 aaPredicted RBP17.98■□□□□ 0.47
DDR1-254ENST00000504679 FOXP3Q9BZS1 431 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 TMEM168Q9H0V1 697 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CATSPERZQ9NTU4 200 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 UCKL1Q9NWZ5 548 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 GPR34Q9UPC5 381 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 FAM169AQ9Y6X4 670 aa17.98■□□□□ 0.47
DDR1-254ENST00000504679 CHUKO15111 745 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 KMOO15229 486 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 EIF3HO15372 352 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDR1-254ENST00000504679 FLRT2O43155 660 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 ANXA6P08133 673 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 ALPPL2P10696 532 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 FOXN2P32314 431 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 ELK3P41970 407 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 GRK6P43250 576 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 KHDC1Q4VXA5 237 aaKnown RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 AARS2Q5JTZ9 985 aaKnown RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 HP1BP3Q5SSJ5 553 aaPredicted RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 MRNIPQ6NTE8 343 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 LVRNQ6Q4G3 990 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 KANSL1Q7Z3B3 1105 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 TAF8Q7Z7C8 310 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms