RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TBC1D29Q9UFV1 150 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 AAR2Q9Y312 384 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 KCTD3Q9Y597 815 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 CELSR3Q9NYQ7 3312 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 DSPP15924 2871 aaKnown RBP14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CFAP47Q6ZTR5 3102 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 B4GAT1O43505 415 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CDK14O94921 469 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 TNFSF15O95150 251 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 EPOP01588 193 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CCDC175P0C221 793 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 MPSTP25325 297 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 HMGCLP35914 325 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 ABCG1P45844 678 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 GDF10P55107 478 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 B4GALNT1Q00973 533 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 SNX1Q13596 522 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 GTF2H3Q13889 308 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 LRP8Q14114 963 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 RAB11FIP2Q7L804 512 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PIM3Q86V86 326 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 TRAPPC5Q8IUR0 188 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 LRRC8AQ8IWT6 810 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 FBXO39Q8N4B4 442 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CCDC112Q8NEF3 446 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 NAT14Q8WUY8 206 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 AHCYL2Q96HN2 611 aaKnown RBP14.08□□□□□ -0.16
HOXC9-202ENST00000504557 TTC25Q96NG3 672 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 TMEM74Q96NL1 305 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PLEKHG4BQ96PX9 1271 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 SLC38A3Q99624 504 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 NUDT22Q9BRQ3 303 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CARD9Q9H257 536 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 SEMA6CQ9H3T2 930 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 RMI1Q9H9A7 625 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 IL26Q9NPH9 171 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PRDM8Q9NQV8 689 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PIH1D1Q9NWS0 290 aaKnown RBP14.08□□□□□ -0.16
HOXC9-202ENST00000504557 KCNK4Q9NYG8 393 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 IL17CQ9P0M4 197 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PISDQ9UG56 409 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 TMPRSS11EQ9UL52 423 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 PIKFYVEQ9Y2I7 2098 aa14.08□□□□□ -0.16
HOXC9-202ENST00000504557 CCDC78A2IDD5 438 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 PDZK1P1A8MUH7 402 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 CCL22O00626 93 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 JMJD7P0C870 316 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 PNLIPP16233 465 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 TPH1P17752 444 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 PBLDP30039 288 aaPredicted RBP14.07□□□□□ -0.16
HOXC9-202ENST00000504557 AKT1P31749 480 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 CA5AP35218 305 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 PCBP4P57723 403 aaKnown RBP14.07□□□□□ -0.16
HOXC9-202ENST00000504557 KLF1Q13351 362 aaPredicted RBP14.07□□□□□ -0.16
HOXC9-202ENST00000504557 SEPT6Q14141 434 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 SNAP47Q5SQN1 464 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 PDPK2PQ6A1A2 396 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 MICALCLQ6ZW33 695 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 LRRTM4Q86VH4 590 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 LSMEM2Q8N112 164 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 RCBTB1Q8NDN9 531 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 OR4K2Q8NGD2 314 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 C1orf54Q8WWF1 131 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 THSD1Q9NS62 852 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 FAM8A1Q9UBU6 413 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 SLC23A2Q9UGH3 650 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 FKBPLQ9UIM3 349 aa14.07□□□□□ -0.16
HOXC9-202ENST00000504557 OR2AG2A6NM03 316 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 C2orf81A6NN90 581 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 PLD2O14939 933 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 KMOO15229 486 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 ZW10O43264 779 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 PRAMEF1O95521 474 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 METTL18O95568 372 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 CPNE6O95741 557 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 IFNB1P01574 187 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 ZNF7P17097 686 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 ITIH1P19827 911 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 LPOP22079 712 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 RPL10P27635 214 aaKnown RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 ADRA1AP35348 466 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 MAPK10P53779 464 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 DRG2P55039 364 aaKnown RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 HHEXQ03014 270 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 TMEM115Q12893 351 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 TAF1AQ15573 450 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 C17orf82Q86X59 251 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 SFRP1Q8N474 314 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 OR13C4Q8NGS5 318 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 LRRC45Q96CN5 670 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 ZNF578Q96N58 590 aaPredicted RBP14.06□□□□□ -0.16
HOXC9-202ENST00000504557 FAM96AQ9H5X1 160 aa14.06□□□□□ -0.16
HOXC9-202ENST00000504557 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms