RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 LINC00301Q8NCQ3 95 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 ATL2Q8NHH9 583 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 TFAP2BQ92481 460 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 HEPHQ9BQS7 1158 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 ASPSCR1Q9BZE9 553 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 TMEM168Q9H0V1 697 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 FAM204AQ9H8W3 233 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 POPDC2Q9HBU9 364 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 DTLQ9NZJ0 730 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 FBXL7Q9UJT9 491 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 CROTQ9UKG9 612 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 VANGL2Q9ULK5 521 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 PCDHB4Q9Y5E5 795 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 SHANK1Q9Y566 2161 aa7.63□□□□□ -1.19
VPS45-210ENST00000497638 CSMD1Q96PZ7 3565 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 C16orf96A6NNT2 1141 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 H7BY64 318 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 AREL1O15033 823 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ZW10O43264 779 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ZNF821O75541 412 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 CYP7B1O75881 506 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 RNF224P0DH78 156 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 FGF3P11487 239 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 ZNF28P17035 718 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 HTR1BP28222 390 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 OAS2P29728 719 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 RPL34P49207 117 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 CCNHP51946 323 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 YWHAZP63104 245 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 CDK17Q00537 523 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 SLC20A2Q08357 652 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 HLTFQ14527 1009 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS45-210ENST00000497638 NFATC4Q14934 902 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 SF1Q15637 639 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 ARHGAP44Q17R89 818 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 DEFB109BQ30KR1 87 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 EDRF1Q3B7T1 1238 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 C5orf22Q49AR2 442 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ACBD5Q5T8D3 534 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 RETSATQ6NUM9 610 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 TMEM270Q6UE05 265 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 LINGO4Q6UY18 593 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 SETD3Q86TU7 594 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 FAM114A1Q8IWE2 563 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 CCDC13Q8IYE1 715 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 CPT1CQ8TCG5 803 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 DVL3Q92997 716 aaPredicted RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 MOCOSQ96EN8 888 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 TEFMQ96QE5 360 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 INTS2Q9H0H0 1204 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 ZNF768Q9H5H4 540 aaKnown RBP7.62□□□□□ -1.19
VPS45-210ENST00000497638 ST7Q9NRC1 585 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 DDIT4Q9NX09 232 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 LRIT1Q9P2V4 623 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 KLQ9UEF7 1012 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ITM2BQ9Y287 266 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 COQ4Q9Y3A0 265 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 B3GALT1Q9Y5Z6 326 aa7.62□□□□□ -1.19
VPS45-210ENST00000497638 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 ZFHX3Q15911 3703 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 IGHV5-10-1A0A0J9YXX1 117 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 NPEPPSL1A6NEC2 478 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 B2RBV5 119 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 B4E171 279 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 AKAP8O43823 692 aaKnown RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 SUSD5O60279 629 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 TM7SF2O76062 418 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 FSHBP01225 129 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 SCG5P05408 212 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 TCN2P20062 427 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 CSTF2P33240 577 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS45-210ENST00000497638 TSPAN7P41732 249 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 SERPINH1P50454 418 aaKnown RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 SRP54P61011 504 aaKnown RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 PITX1P78337 314 aaPredicted RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 B4GALNT1Q00973 533 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 IRF4Q15306 451 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 TCEA2Q15560 299 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 KRTAP21-3Q3LHN1 58 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 ZNF805Q5CZA5 627 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 CARD16Q5EG05 197 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 DCAF12Q5T6F0 453 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 ASB18Q6ZVZ8 466 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 RD3Q7Z3Z2 195 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 GRAMD1CQ8IYS0 662 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 CEP57L1Q8IYX8 460 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 NLGN4XQ8N0W4 816 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 FAM46DQ8NEK8 389 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 NLGN4YQ8NFZ3 816 aaPredicted RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 KIAA1524Q8TCG1 905 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 CXorf40AQ8TE69 158 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 STARD8Q92502 1023 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 ART4Q93070 314 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 TSACCQ96A04 125 aaPredicted RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 MED15Q96RN5 788 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 ZSWIM1Q9BR11 485 aa7.61□□□□□ -1.19
VPS45-210ENST00000497638 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
VPS45-210ENST00000497638 ZSCAN16Q9H4T2 348 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms