RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PTRH2Q9Y3E5 179 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 TTLL3Q9Y4R7 772 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 TMEM8BA6NDV4 472 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 ADAMDEC1O15204 470 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 SLC28A2O43868 658 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 PAPSS2O95340 614 aaPredicted RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 ZBTB11O95625 1053 aaPredicted RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 PPP1R3DO95685 299 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 NR2F1P10589 423 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 PLA2G2AP14555 144 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 DAOP14920 347 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 NNMTP40261 264 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 TMPOP42166 694 aaKnown RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 HSD17B4P51659 736 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 BECN1Q14457 450 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 SYT16Q17RD7 645 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 KRTCAP3Q53RY4 240 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 ATG9AQ7Z3C6 839 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 AACSQ86V21 672 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 SATL1Q86VE3 508 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 LINC00346Q8IVM7 164 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 CEP97Q8IW35 865 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 RNF113BQ8IZP6 322 aaKnown RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 C1orf87Q8N0U7 546 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 NME8Q8N427 588 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 RBMXL3Q8N7X1 1067 aaKnown RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 LILRB1Q8NHL6 650 aaPredicted RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 GSDMBQ8TAX9 411 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 THAP6Q8TBB0 222 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 TMEM19Q96HH6 336 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 DACH2Q96NX9 599 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 KIFC3Q9BVG8 833 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 CD93Q9NPY3 652 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 CLIC5Q9NZA1 410 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 SELENONQ9NZV5 590 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 MRPL15Q9P015 296 aaKnown RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 DNAJB4Q9UDY4 337 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 PADI1Q9ULC6 663 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 KCNS2Q9ULS6 477 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 PLAGL1Q9UM63 463 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 AMDHD2Q9Y303 409 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 TMEM184BQ9Y519 407 aaPredicted RBP4.7□□□□□ -1.66
VPS36-206ENST00000497149 PRAG1Q86YV5 1406 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 PTPRCP08575 1304 aa4.7□□□□□ -1.66
VPS36-206ENST00000497149 TRIP12Q14669 1992 aaPredicted RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 MAGEA13PA6NCF6 341 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 LILRA5A6NI73 299 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 A8MV72 311 aaPredicted RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 ZNF587BE7ETH6 402 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 CAMTA2O94983 1202 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 GH2P01242 217 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 AFPP02771 609 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 TRIM21P19474 475 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 HRH2P25021 359 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 NUCB1Q02818 461 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 SLC20A2Q08357 652 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 KEAP1Q14145 624 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 SLC39A14Q15043 492 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 KIF19Q2TAC6 998 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 MFSD4BQ5TF39 518 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 TRNP1Q6NT89 227 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 ZNF517Q6ZMY9 492 aaPredicted RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 TPRG1Q6ZUI0 275 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 ARMC9Q7Z3E5 817 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 RBM23Q86U06 439 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 UTP15Q8TED0 518 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 SLC20A1Q8WUM9 679 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 PRPF31Q8WWY3 499 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 PIGTQ969N2 578 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 BICD1Q96G01 975 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 ADGRG7Q96K78 797 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 CEP295NLQ96MC4 621 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 SMC6Q96SB8 1091 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 PAFAH2Q99487 392 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 GFI1Q99684 422 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 MEIS3Q99687 375 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 CENPOQ9BU64 300 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 DNAJC18Q9H819 358 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 UBTD1Q9HAC8 227 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 PSD3Q9NYI0 1048 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 NKIRAS2Q9NYR9 191 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 MALT1Q9UDY8 824 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 CHORDC1Q9UHD1 332 aaPredicted RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 TSPYL4Q9UJ04 414 aa4.69□□□□□ -1.66
VPS36-206ENST00000497149 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.69□□□□□ -1.66
VPS36-206ENST00000497149 A0A0G2JPF8 293 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 A0A1W2PP11 408 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 LNP1A1A4G5 178 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 HNRNPCL3B7ZW38 293 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 SH2B2O14492 632 aaPredicted RBP4.68□□□□□ -1.66
VPS36-206ENST00000497149 KCNAB3O43448 404 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 ZNF217O75362 1048 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 AVILO75366 819 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 RSL1D1O76021 490 aaKnown RBP4.68□□□□□ -1.66
VPS36-206ENST00000497149 HNRNPCL4P0DMR1 293 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 MYOD1P15172 320 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 PRLRP16471 622 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 STAT2P52630 851 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 ART1P52961 327 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 KRTAP10-11P60412 298 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms