RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 A0A0J9YYE9 177 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 E7ENX8 843 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TRIM24O15164 1050 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TGM5O43548 720 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 EFCAB14O75071 495 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SOCS5O75159 536 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PRAMEF1O95521 474 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MLYCDO95822 493 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 IGSF6O95976 241 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TRBC1P01850 177 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 LBPP18428 481 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 AGTR2P50052 363 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 IRX1P78414 480 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 LMAN2Q12907 356 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SFT2D3Q587I9 215 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 FBXO48Q5FWF7 155 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 OGFRL1Q5TC84 451 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 FAM151BQ6UXP7 276 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MIER2Q8N344 545 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PAF1Q8N7H5 531 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GRIN3AQ8TCU5 1115 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 ROPN1LQ96C74 230 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TUBGCP3Q96CW5 907 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 YME1L1Q96TA2 773 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 C19orf43Q9BQ61 176 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 ZFYVE1Q9HBF4 777 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GEMIN8Q9NWZ8 242 aaKnown RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CD274Q9NZQ7 290 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 EPS15L1Q9UBC2 864 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GIMAP2Q9UG22 337 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SCOCQ9UIL1 159 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 C1orf232A0A0U1RR37 186 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 A0A1B0GTL3 188 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 NR5A2O00482 541 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 HTRA2O43464 458 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 ESRRBO95718 433 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 CHEK2O96017 543 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 LINC00032P0C843 101 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 TCN1P20061 433 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 HK3P52790 923 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 AQP4P55087 323 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 HTRA3P83110 453 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 GRB7Q14451 532 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 RBBP7Q16576 425 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 C8orf82Q6P1X6 216 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 SYVN1Q86TM6 617 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 TMEM126BQ8IUX1 230 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 FUNDC1Q8IVP5 155 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 PCYOX1LQ8NBM8 494 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 FAM156AQ8NDB6 213 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 OR56A4Q8NGH8 313 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 GATA6Q92908 595 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 LRRC3Q9BY71 257 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 CLPBQ9H078 707 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 PLK2Q9NYY3 685 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 KIAA1522Q9P206 1035 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-220ENST00000496711 CROTQ9UKG9 612 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 DHRS7Q9Y394 339 aa12.92□□□□□ -0.34
GARNL3-220ENST00000496711 IQCF5A8MTL0 148 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GIPC1O14908 333 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 MATN4O95460 622 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CTSAP10619 480 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 UROSP10746 265 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 HGFP14210 728 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 IDO1P14902 403 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CSF2RAP15509 400 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ZNF7P17097 686 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ITGALP20701 1170 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CD70P32970 193 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ADGRE1Q14246 886 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 TGFBIQ15582 683 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GRAMD1BQ3KR37 738 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 RARS2Q5T160 578 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CAPRIN2Q6IMN6 1127 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 OGFOD2Q6N063 350 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 TPGS1Q6ZTW0 290 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SNX20Q7Z614 316 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ADAMTSL2Q86TH1 951 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SPATA24Q86W54 205 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 FIBINQ8TAL6 211 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PDLIM5Q96HC4 596 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms