RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CTAGE9A4FU28 777 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 OR5K3A6NET4 321 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 TMEM178BH3BS89 294 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 NDUFS3O75489 264 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 TMEM63AO94886 807 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 ICAM1P05362 532 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 PRSS1P07477 247 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 CFC1P0CG37 223 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 CTAGE8P0CG41 777 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 MMP14P50281 582 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 MRPS34P82930 218 aaKnown RBP5.4□□□□□ -1.54
SF3B1-212ENST00000496458 LRIF1Q5T3J3 769 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 NSUN5P2Q63ZY6 315 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 ARHGAP12Q8IWW6 846 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 CTAGE4Q8IX94 777 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 KLHDC8BQ8IXV7 354 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 ADSSL1Q8N142 457 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 TDRD7Q8NHU6 1098 aaKnown RBP5.4□□□□□ -1.54
SF3B1-212ENST00000496458 HM13Q8TCT9 377 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 ZKSCAN4Q969J2 545 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-212ENST00000496458 PDZD7Q9H5P4 517 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 UPF2Q9HAU5 1272 aaKnown RBP5.4□□□□□ -1.54
SF3B1-212ENST00000496458 FAM118AQ9NWS6 357 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 TCF19Q9Y242 345 aa5.4□□□□□ -1.54
SF3B1-212ENST00000496458 IGLV5-45A0A087WSX0 123 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 A0A1W2PP11 408 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 J3KRW8 73 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 HCRTR2O43614 444 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 IGHV4-39P01824 125 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 FGF5P12034 268 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 AHRP35869 848 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 PIK3CAP42336 1068 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 TAS2R40P59535 323 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
SF3B1-212ENST00000496458 NIPAL4Q0D2K0 466 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 GAGE5Q13069 117 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 GAGE6Q13070 117 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 NAB2Q15742 525 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 ADIPOQQ15848 244 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 LCN10Q6JVE6 187 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 TMTC3Q6ZXV5 915 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 ATG9AQ7Z3C6 839 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 SGCDQ92629 289 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 PHF21AQ96BD5 680 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 ST6GAL2Q96JF0 529 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 EGLN2Q96KS0 407 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 ZNF354BQ96LW1 612 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 C7orf26Q96N11 449 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 UNC45AQ9H3U1 944 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 TCP11L1Q9NUJ3 509 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 EHD2Q9NZN4 543 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 KLHL9Q9P2J3 617 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 UBA2Q9UBT2 640 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-212ENST00000496458 FBXW11Q9UKB1 542 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 PIAS3Q9Y6X2 628 aa5.39□□□□□ -1.55
SF3B1-212ENST00000496458 SYNGR3O43761 229 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 PAK4O96013 591 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-212ENST00000496458 EIF2S1P05198 315 aaKnown RBP5.38□□□□□ -1.55
SF3B1-212ENST00000496458 NR1D1P20393 614 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 NR2F2P24468 414 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 NFKBIAP25963 317 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 CDKN1AP38936 164 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 MPP1Q00013 466 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 SREBF2Q12772 1141 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 PLEKHM3Q6ZWE6 761 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 RNF168Q8IYW5 571 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-212ENST00000496458 UCMAQ8WVF2 138 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 ARHGEF2Q92974 986 aaKnown RBP5.38□□□□□ -1.55
SF3B1-212ENST00000496458 SEPT5Q99719 369 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-212ENST00000496458 MAGIXQ9H6Y5 334 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 SCRT2Q9NQ03 307 aa5.38□□□□□ -1.55
SF3B1-212ENST00000496458 B4E171 279 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 CD4P01730 458 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 TSPAN7P41732 249 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 ARCN1P48444 511 aaKnown RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 CRIP2P52943 208 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 GALCP54803 685 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 SOWAHCQ53LP3 525 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 CCNYL2Q5T2Q4 361 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 CCDC70Q6NSX1 233 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 NCEH1Q6PIU2 408 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 GLDNQ6ZMI3 551 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 PXKQ7Z7A4 578 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 CCDC190Q86UF4 302 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 PM20D2Q8IYS1 436 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 PDILTQ8N807 584 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 KLHDC9Q8NEP7 349 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 OR8K5Q8NH50 307 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 GRAPLQ8TC17 118 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 ZNF501Q96CX3 271 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 C1orf74Q96LT6 269 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 NAP1L4Q99733 375 aaKnown RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 SEMA3CQ99985 751 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 MTMR10Q9NXD2 777 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 ORC3Q9UBD5 711 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-212ENST00000496458 SWAP70Q9UH65 585 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms