RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.13
CXCL12-208ENST00000496375 RPS6KA1Q15418 735 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 NRSN1Q8IZ57 195 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 EXD3Q8N9H8 876 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 TTC13Q8NBP0 860 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 OR4D9Q8NGE8 314 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 ACTL9Q8TC94 416 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 EXTL1Q92935 676 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 TADA1Q96BN2 335 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 VAT1Q99536 393 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 KCNK4Q9NYG8 393 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 STMND1H3BQB6 276 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 JCHAINP01591 159 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 FGF3P11487 239 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 WT1P19544 449 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 MPSTP25325 297 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 PTPN3P26045 913 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 OTUD4Q01804 1114 aaKnown RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 AP1B1Q10567 949 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 WASHC5Q12768 1159 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 SQSTM1Q13501 440 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 LRP8Q14114 963 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 TEX44Q53QW1 395 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 RAVER1Q8IY67 606 aaKnown RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 AGBL5Q8NDL9 886 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 SLC37A2Q8TED4 501 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 PMEPA1Q969W9 287 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 TEKT5Q96M29 485 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 TAAR9Q96RI9 348 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 LYSMD1Q96S90 227 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 SLC38A3Q99624 504 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 ARHGAP9Q9BRR9 750 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 TMEM9Q9P0T7 183 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 PYCARDQ9ULZ3 195 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 PRKAB1Q9Y478 270 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 JRKLQ9Y4A0 524 aa14.25□□□□□ -0.13
CXCL12-208ENST00000496375 PCYT1BQ9Y5K3 369 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 OAS3Q9Y6K5 1087 aaKnown RBP14.25□□□□□ -0.13
CXCL12-208ENST00000496375 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SLC28A2O43868 658 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 EML2O95834 649 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 ATP1A1P05023 1023 aaKnown RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 ITGB2P05107 769 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 MMP2P08253 660 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 THRAP10827 490 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 CSTF2P33240 577 aaKnown RBP eCLIP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 CD86P42081 329 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 FASLGP48023 281 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SPINT3P49223 89 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 ARSDP51689 593 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 RPL26P61254 145 aaKnown RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 GPLD1P80108 840 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SEL1L2Q5TEA6 688 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 CHST15Q7LFX5 561 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SLC13A5Q86YT5 568 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SFRP1Q8N474 314 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SLC35B2Q8TB61 432 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 HTR3CQ8WXA8 447 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 ART4Q93070 314 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 HAUS1Q96CS2 278 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 AHCYL2Q96HN2 611 aaKnown RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 WDR24Q96S15 920 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 DPYSL5Q9BPU6 564 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 FRMD8P1Q9BZ68 369 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 VPS18Q9P253 973 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 ZNHIT2Q9UHR6 403 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 CNOT6Q9ULM6 557 aaKnown RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
CXCL12-208ENST00000496375 PCDHGA3Q9Y5H0 932 aa14.24□□□□□ -0.13
CXCL12-208ENST00000496375 USP27XA6NNY8 438 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 PYCARD-AS1I3L0S3 204 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 DNAJC6O75061 913 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 RBP3P10745 1247 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 CYP4F2P78329 520 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 NFATC3Q12968 1075 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 QPCTQ16769 361 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 HENMT1Q5T8I9 393 aaKnown RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 TMEM71Q6P5X7 295 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 XKR5Q6UX68 686 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 ZC3H18Q86VM9 953 aaKnown RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 CDKL3Q8IVW4 592 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 OR10G6Q8NH81 332 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 IMP4Q96G21 291 aaKnown RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 MLPHQ9BV36 600 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-208ENST00000496375 FAM83DQ9H4H8 585 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 SLC39A1Q9NY26 324 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 PKD2L2Q9NZM6 624 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 TRHDEQ9UKU6 1024 aa14.23□□□□□ -0.13
CXCL12-208ENST00000496375 KCNK6Q9Y257 313 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms