RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CSKP41240 450 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 NME5P56597 212 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 GRM2Q14416 872 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 VPS26BQ4G0F5 336 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 IL23RQ5VWK5 629 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 FRA10AC1Q70Z53 315 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ANKRD33Q7Z3H0 272 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TICAM1Q8IUC6 712 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 CPNE9Q8IYJ1 553 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 MINDY1Q8N5J2 469 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 EME1Q96AY2 570 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 DUS3LQ96G46 650 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 MYO19Q96H55 970 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 RIC8BQ9NVN3 520 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 NUDT4Q9NZJ9 180 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 LSM7Q9UK45 103 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TCRBV3S1A0A5B6 114 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 RNASEH2AO75792 299 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 PGLSO95336 258 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 CYBBP04839 570 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ZNF7P17097 686 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 SLC7A1P30825 629 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 MAPK8P45983 427 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 MRPL19P49406 292 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 KCNK10P57789 538 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 FOXM1Q08050 763 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TGFBIQ15582 683 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 FBXO48Q5FWF7 155 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ATXN7L2Q5T6C5 722 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 IRAK1BP1Q5VVH5 260 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 FAM219BQ5XKK7 198 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 CNKSR3Q6P9H4 555 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 GPRIN3Q6ZVF9 776 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TMEM150AQ86TG1 271 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 SYVN1Q86TM6 617 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TCEAL8Q8IYN2 117 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 SLC39A11Q8N1S5 342 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 PAF1Q8N7H5 531 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TMEM102Q8N9M5 508 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ZNF296Q8WUU4 475 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ACDQ96AP0 544 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 DEFB118Q96PH6 123 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 C19orf43Q9BQ61 176 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 GPATCH1Q9BRR8 931 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TRIM15Q9C019 465 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 P2RY12Q9H244 342 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 ABCD2Q9UBJ2 740 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 MAFFQ9ULX9 164 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 DHRS7Q9Y394 339 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TIMM22Q9Y584 194 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 TNPO3Q9Y5L0 923 aaKnown RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 OR51B4Q9Y5P0 310 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 INSL5Q9Y5Q6 135 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 A0A1B0GTL3 188 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 CARNS1A5YM72 827 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 AP1G1O43747 822 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 DNAJA2O60884 412 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 S100BP04271 92 aaPredicted RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 PRR35P0CG20 571 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 CAPN3P20807 821 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 PEX19P40855 299 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 AGTR2P50052 363 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 CLCN7P51798 805 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 BCL2L1Q07817 233 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 SPATS1Q496A3 300 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 C6orf10Q5SRN2 563 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 BLOC1S3Q6QNY0 202 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 Q6ZNB5 142 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 LYSMD3Q7Z3D4 306 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 ADAMTSL2Q86TH1 951 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 ARL14EPQ8N8R7 260 aaPredicted RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 PDLIM5Q96HC4 596 aaKnown RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 CLPBQ9H078 707 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 ZFYVE1Q9HBF4 777 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 MRPL17Q9NRX2 175 aaKnown RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 DNMT3BQ9UBC3 853 aaKnown RBP10.96□□□□□ -0.65
CMSS1-208ENST00000496116 GIMAP2Q9UG22 337 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 GPR45Q9Y5Y3 372 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 CPQQ9Y646 472 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 AP4B1Q9Y6B7 739 aa10.96□□□□□ -0.65
CMSS1-208ENST00000496116 C15orf38-AP3S2A0A0A6YYH1 394 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 H0YJX3 145 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 E2F3O00716 465 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 SCAMP3O14828 347 aaKnown RBP10.96□□□□□ -0.66
CMSS1-208ENST00000496116 OLFM2O95897 454 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 CTPS1P17812 591 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 RPS3P23396 243 aaKnown RBP eCLIP10.96□□□□□ -0.66
CMSS1-208ENST00000496116 RGS4P49798 205 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 CLCN2P51788 898 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 HK3P52790 923 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms