RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TGM7Q96PF1 710 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 TWSG1Q9GZX9 223 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 KLC4Q9NSK0 619 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 ADGRG1Q9Y653 693 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 SLC30A1Q9Y6M5 507 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 SPTAN1Q13813 2472 aaKnown RBP17.31■□□□□ 0.36
TMEM53-209ENST00000495630 ANKRD66B4E2M5 251 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 SPAG6O75602 509 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 SEPHS1P49903 392 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 SH3BP2P78314 561 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 KRT81Q14533 505 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
TMEM53-209ENST00000495630 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM53-209ENST00000495630 FHL5Q5TD97 284 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 CYB5D1Q6P9G0 228 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 SASS6Q6UVJ0 657 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 NIPA2Q8N8Q9 360 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 GALNT11Q8NCW6 608 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 LPCAT1Q8NF37 534 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 KLHL6Q8WZ60 621 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 MLPHQ9BV36 600 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-209ENST00000495630 HSD3B7Q9H2F3 369 aa17.3■□□□□ 0.36
TMEM53-209ENST00000495630 SCHIP1Q9P0W5 487 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF624Q9P2J8 865 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-209ENST00000495630 CDC14CA4D256 554 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 TTLL8A6PVC2 850 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 C21orf140B9A014 251 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 SLC25A14O95258 325 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-209ENST00000495630 NIPAL4Q0D2K0 466 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 KLHL30Q0D2K2 578 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 SEMA5AQ13591 1074 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 DNASE1L3Q13609 305 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
TMEM53-209ENST00000495630 QPCTQ16769 361 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 CAPRIN2Q6IMN6 1127 aaKnown RBP17.29■□□□□ 0.36
TMEM53-209ENST00000495630 ABRAXAS1Q6UWZ7 409 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 PRSS42Q7Z5A4 293 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 TMEM135Q86UB9 458 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 PPP1R3BQ86XI6 285 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 TRIM48Q8IWZ4 208 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 EFCAB3Q8N7B9 438 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 SEC14L1Q92503 715 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 ZDHHC12Q96GR4 267 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 FCRL4Q96PJ5 515 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 OSGEPL1Q9H4B0 414 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 PLEKHB1Q9UF11 243 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-209ENST00000495630 EPHA6Q9UF33 1036 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
TMEM53-209ENST00000495630 SPTBN1Q01082 2364 aaKnown RBP17.28■□□□□ 0.36
TMEM53-209ENST00000495630 CHUKO15111 745 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 KMOO15229 486 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 RASSF9O75901 435 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 AGFG2O95081 481 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 LEPRP48357 1165 aaKnown RBP17.28■□□□□ 0.36
TMEM53-209ENST00000495630 SLC25A11Q02978 314 aaKnown RBP17.28■□□□□ 0.36
TMEM53-209ENST00000495630 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 CACHD1Q5VU97 1274 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 WASH2PQ6VEQ5 465 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 ADGRG6Q86SQ4 1221 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
TMEM53-209ENST00000495630 THAP4Q8WY91 577 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 ELMO2Q96JJ3 720 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 ADGRE3Q9BY15 652 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 GPR87Q9BY21 358 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 SLC40A1Q9NP59 571 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 WASH6PQ9NQA3 447 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 RTN4Q9NQC3 1192 aaKnown RBP17.28■□□□□ 0.36
TMEM53-209ENST00000495630 RAD18Q9NS91 495 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 POT1Q9NUX5 634 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 SLC23A2Q9UGH3 650 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 LNPEPQ9UIQ6 1025 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 TTLL3Q9Y4R7 772 aa17.28■□□□□ 0.36
TMEM53-209ENST00000495630 ICE1Q9Y2F5 2266 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 KIF1CO43896 1103 aaKnown RBP17.27■□□□□ 0.36
TMEM53-209ENST00000495630 MFSD11O43934 449 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 MTA2O94776 668 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 PDGFAP04085 211 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF7P17097 686 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-209ENST00000495630 NELFEP18615 380 aaKnown RBP17.27■□□□□ 0.36
TMEM53-209ENST00000495630 CASP14P31944 242 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 ARSEP51690 589 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 HADHQ16836 314 aaKnown RBP17.27■□□□□ 0.36
TMEM53-209ENST00000495630 BPHLQ86WA6 291 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-209ENST00000495630 CPT1CQ8TCG5 803 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 RNF31Q96EP0 1072 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 ZSCAN5AQ9BUG6 496 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 ZFYVE1Q9HBF4 777 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 PDE7BQ9NP56 450 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 SEMA5BQ9P283 1151 aa17.27■□□□□ 0.36
TMEM53-209ENST00000495630 RP1L1Q8IWN7 2480 aaPredicted RBP17.27■□□□□ 0.35
TMEM53-209ENST00000495630 VEGFDO43915 354 aa17.26■□□□□ 0.35
TMEM53-209ENST00000495630 HLA-DQB2P05538 268 aa17.26■□□□□ 0.35
TMEM53-209ENST00000495630 CD48P09326 243 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms