RNA–Protein interactions for RNA: ENST00000495357.1

CCDC39-AS1-201, CCDC39 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene CCDC39-AS1, Length 283 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-AS1-201ENST00000495357 HILS1P60008 231 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 GOLGA8DPQ0D2H9 430 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 GLDNQ6ZMI3 551 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ADSSL1Q8N142 457 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SIL1Q9H173 461 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 HCFC1R1Q9NWW0 138 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 KLHL9Q9P2J3 617 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ORC3Q9UBD5 711 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 FBXW11Q9UKB1 542 aa4.33□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 KANSL1LA0AUZ9 987 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 OR5K3A6NET4 321 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EIF4E1BA6NMX2 242 aaKnown RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SCAMP1O15126 338 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SOCS5O75159 536 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 WISP2O76076 250 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 MBD4O95243 580 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 IGHV4-39P01824 125 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 LAMP2P13473 410 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 NFKBIAP25963 317 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ACADLP28330 430 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 GAGE5Q13069 117 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 GAGE6Q13070 117 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 NAB2Q15742 525 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RAB6CQ53S08 254 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SIRPB2Q5JXA9 342 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PDSS1Q5T2R2 415 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SNX30Q5VWJ9 437 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PMS2CLQ68D20 193 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SLC26A9Q7LBE3 791 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SLC38A9Q8NBW4 561 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 HJURPQ8NCD3 748 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 TRPC4APQ8TEL6 797 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 DNAAF4Q8WXU2 420 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ZKSCAN4Q969J2 545 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 LINGO1Q96FE5 620 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 C1orf74Q96LT6 269 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ZNF583Q96ND8 569 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 NEUROD6Q96NK8 337 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ITPAQ9BY32 194 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RAB6CQ9H0N0 254 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 DIAPH3Q9NSV4 1193 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 OLA1Q9NTK5 396 aaKnown RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 TCP11L1Q9NUJ3 509 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ZNF69Q9UC07 566 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 POLG2Q9UHN1 485 aa4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 R3HDM2Q9Y2K5 976 aaKnown RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 TMEM184BQ9Y519 407 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 A0A087X0M5 115 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 A0A1B0GX30 115 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EPB41L2O43491 1005 aaKnown RBP4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SYNGR3O43761 229 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RNASEH2AO75792 299 aaKnown RBP4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 CFC1BP0CG36 223 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 CFC1P0CG37 223 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RARGP13631 454 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PAX1P15863 534 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 CHMP24386 653 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 MAN1A1P33908 653 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 AMPHP49418 695 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 HOXA1P49639 335 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 TERF1P54274 439 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 SREBF2Q12772 1141 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PDE1CQ14123 709 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 HAUS3Q68CZ6 603 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PLA2G4FQ68DD2 849 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 KLHDC8BQ8IXV7 354 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 RBM15BQ8NDT2 890 aaKnown RBP4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 KLHDC9Q8NEP7 349 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 OR8K5Q8NH50 307 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 UCMAQ8WVF2 138 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EVI5LQ96CN4 794 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 MPP4Q96JB8 637 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 LRMDAQ9H2I8 198 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EPB41L5Q9HCM4 733 aa4.31□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 DVL1O14640 695 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 MAP2K7O14733 419 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PAK4O96013 591 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 AMBPP02760 352 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 ZNF23P17027 643 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 MAPK4P31152 587 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 AHRP35869 848 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 DVL1P1P54792 670 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 GALCP54803 685 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 TFAP4Q01664 338 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EIF4A2Q14240 407 aaKnown RBP4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 KRT32Q14532 448 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 CCNYL2Q5T2Q4 361 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 PM20D2Q8IYS1 436 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 HACE1Q8IYU2 909 aa4.3□□□□□ -1.72
CCDC39-AS1-201ENST00000495357 NGEFQ8N5V2 710 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms