RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMEM115Q12893 351 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 NR1D2Q14995 579 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CHRNA6Q15825 494 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 TBC1D25Q3MII6 688 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 AMZ1Q400G9 498 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF648Q5T619 568 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CRTC3Q6UUV7 619 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 LRRC69Q6ZNQ3 347 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 LINC00523Q86TU6 105 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 SLC9B2Q86UD5 537 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 PIM3Q86V86 326 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 TRAPPC5Q8IUR0 188 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 SFRP1Q8N474 314 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CCDC89Q8N998 374 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 OR4K2Q8NGD2 314 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 PATE1Q8WXA2 126 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 FGF11Q92914 225 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 RTP4Q96DX8 246 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 LIN37Q96GY3 246 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 C19orf43Q9BQ61 176 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 TIMM29Q9BSF4 260 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 THSD1Q9NS62 852 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 KLC4Q9NSK0 619 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 KCNK4Q9NYG8 393 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 AKAP7Q9P0M2 348 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 PCDHGA8Q9Y5G5 932 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 WDFY3Q8IZQ1 3526 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 IGF2RP11717 2491 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 FREM2Q5SZK8 3169 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 KIR2DS5A0A0G2JLQ3 304 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 A0A0G2JNG1 304 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 ERI2A8K979 691 aaKnown RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 E7EVH7 732 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 KIR2DS3K7RE56 304 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 MTX2O75431 263 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 DXOO77932 396 aaKnown RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 PRAMEF1O95521 474 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 IFNB1P01574 187 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 F3P13726 295 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF7P17097 686 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 AKT1P31749 480 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 CCKBRP32239 447 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 MLLT3P42568 568 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 LMAN1P49257 510 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 GDF10P55107 478 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 OR1D5P58170 312 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 ERVPABLB-1P60509 514 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 GPLD1P80108 840 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 B4GALNT1Q00973 533 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 SPARCL1Q14515 664 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 KIR2DS5Q14953 304 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 FOXR1Q6PIV2 292 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 KLHDC8BQ8IXV7 354 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 DDHD1Q8NEL9 900 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF398Q8TD17 642 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 SLC37A2Q8TED4 501 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 TMEM159Q96B96 161 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 AHCYL2Q96HN2 611 aaKnown RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 DCBLD2Q96PD2 775 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 DPYSL5Q9BPU6 564 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 SMOXQ9NWM0 555 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 TBC1D29Q9UFV1 150 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
HDAC4-211ENST00000494800 PCYT1BQ9Y5K3 369 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-211ENST00000494800 USP24Q9UPU5 2620 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 KCNJ13O60928 360 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 KRT37O76014 449 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 METTL18O95568 372 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 AP2A1O95782 977 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 MSH3P20585 1137 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 FDFT1P37268 417 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 PDX1P52945 283 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 PCBP4P57723 403 aaKnown RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 HHEXQ03014 270 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 OLIG2Q13516 323 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 OASLQ15646 514 aaKnown RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 LONRF2Q1L5Z9 754 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 PLA2G4EQ3MJ16 856 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 IYDQ6PHW0 289 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 IGF2-ASQ6U949 168 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 OR10G6Q8NH81 332 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 SNIP1Q8TAD8 396 aaKnown RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 C1orf54Q8WWF1 131 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF514Q96K75 400 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 FOXP3Q9BZS1 431 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 ASB8Q9H765 288 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 SARS2Q9NP81 518 aaKnown RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 HOMER3Q9NSC5 361 aa17.4■□□□□ 0.38
HDAC4-211ENST00000494800 ATXN7L1Q9ULK2 861 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-211ENST00000494800 A0A087WV48 116 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 PDZK1P1A8MUH7 402 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 PLD2O14939 933 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 PPM1DO15297 605 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 ZSCAN12O43309 604 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 B4GAT1O43505 415 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A9O60656 530 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms