RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	POLR2M	P0CAP2	368 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	PDHB	P11177	359 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CHRNB2	P17787	502 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ACAT1	P24752	427 aa	Known RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	RFC4	P35249	363 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ACTN2	P35609	894 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	SERPINB8	P50452	374 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	THOP1	P52888	689 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	SLC26A5	P58743	744 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	NLRP5	P59047	1200 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	VBP1	P61758	197 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ABAT	P80404	500 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	KDSR	Q06136	332 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	BYSL	Q13895	437 aa	Known RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	NAA25	Q14CX7	972 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	AARD	Q4LEZ3	155 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	XKR9	Q5GH70	373 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	FSCB	Q5H9T9	825 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	C9orf50	Q5SZB4	431 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CEP85L	Q5SZL2	805 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	PM20D1	Q6GTS8	502 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ZYG11A	Q6WRX3	759 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	RAB11FIP2	Q7L804	512 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	TMEM200A	Q86VY9	491 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	NR2C2AP	Q86WQ0	139 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CCDC50	Q8IVM0	306 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CNTROB	Q8N137	903 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ZBTB44	Q8NCP5	570 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	DENND6B	Q8NEG7	585 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	LMO3	Q8TAP4	145 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	DDI1	Q8WTU0	396 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	DNASE2B	Q8WZ79	361 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	RSC1A1	Q92681	617 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	TUBGCP3	Q96CW5	907 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	LTV1	Q96GA3	475 aa	Predicted RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CEP19	Q96LK0	163 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CMTM3	Q96MX0	182 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	RUNDC3B	Q96NL0	473 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	DDX50	Q9BQ39	737 aa	Known RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	MECR	Q9BV79	373 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	POLDIP3	Q9BY77	421 aa	Known RBP	4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	SIL1	Q9H173	461 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	C2orf40	Q9H1Z8	148 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CENPH	Q9H3R5	247 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	XKR8	Q9H6D3	395 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	FANCE	Q9HB96	536 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	TM9SF3	Q9HD45	589 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	C8orf4	Q9NR00	106 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	IGSF9	Q9P2J2	1179 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	ATXN10	Q9UBB4	475 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	HMGXB4	Q9UGU5	601 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	GJD2	Q9UKL4	321 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	EXOC6B	Q9Y2D4	811 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CRYL1	Q9Y2S2	319 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	CBY1	Q9Y3M2	126 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	UHRF1BP1L	A0JNW5	1464 aa		4.69	□□□□□ -1.66
CCDC66-222	ENST00000494672	LOC100653049	A0A140TA62	436 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	LOC105371267	A0A1B0GV96	52 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CLEC18A	A5D8T8	446 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ACOD1	A6NK06	481 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	LRRIQ3	A6PVS8	624 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MS4A18	H0YCH9	400 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	TSPAN9	O75954	239 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	FLOT1	O75955	427 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	KRT34	O76011	436 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PLG	P00747	810 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	APOE	P02649	317 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ASGR1	P07306	291 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ALOX5	P09917	674 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PRKAR1A	P10644	381 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ACTN1	P12814	892 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PKM	P14618	531 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	EZR	P15311	586 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	HOXB9	P17482	250 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	GAP43	P17677	238 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	DDX5	P17844	614 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CFL1	P23528	166 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MAPK3	P27361	379 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CDC25C	P30307	473 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	GDI1	P31150	447 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	LONP1	P36776	959 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ART1	P52961	327 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	OAZ1	P54368	228 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	FAM3B	P58499	235 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NOP14	P78316	857 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	DOC2A	Q14183	400 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MOG	Q16653	247 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	DUSP6	Q16828	381 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PLK5	Q496M5	336 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	VWA5B1	Q5TIE3	1220 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SNX30	Q5VWJ9	437 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PDPK2P	Q6A1A2	396 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CAVIN1	Q6NZI2	390 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	TMEM154	Q6P9G4	183 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	KRT74	Q7RTS7	529 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms