RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TMEM236Q5W0B7 351 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 CYP2R1Q6VVX0 501 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 CHST15Q7LFX5 561 aaPredicted RBP4.77□□□□□ -1.65
PRKD3-210ENST00000494667 KIF18BQ86Y91 864 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 PHYKPLQ8IUZ5 450 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 C4orf19Q8IY42 314 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
PRKD3-210ENST00000494667 CHTF18Q8WVB6 975 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 HERVK_113Q902F9 699 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 PIGBQ92521 554 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 UFD1Q92890 307 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 PITX2Q99697 317 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 MRPL57Q9BQC6 102 aaKnown RBP4.77□□□□□ -1.65
PRKD3-210ENST00000494667 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 SMOC2Q9H3U7 446 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 TOR3AQ9H497 397 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 GORASP2Q9H8Y8 452 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 ERVMER34-1Q9H9K5 563 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 WARS2Q9UGM6 360 aaKnown RBP4.77□□□□□ -1.65
PRKD3-210ENST00000494667 PSAT1Q9Y617 370 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 STON1Q9Y6Q2 735 aa4.77□□□□□ -1.65
PRKD3-210ENST00000494667 COL4A4P53420 1690 aaPredicted RBP4.77□□□□□ -1.65
PRKD3-210ENST00000494667 ANK1P16157 1881 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 COL1A2P08123 1366 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 A0A096LPK6 155 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EFCAB10A6NFE3 127 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 STX16O14662 325 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 B4GAT1O43505 415 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EEDO75530 441 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EPN2O95208 641 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PRLP01236 227 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 AHSGP02765 367 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 NR3C2P08235 984 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ASNSP08243 561 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ATF6P18850 670 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 BTF3P20290 206 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CPN2P22792 545 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SHMT1P34896 483 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 POU6F2P78424 691 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ORC1Q13415 861 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ANGPT1Q15389 498 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HKDC1Q2TB90 917 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CLLU1Q5K131 121 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZBTB41Q5SVQ8 909 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TFAP2EQ6VUC0 442 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CYHR1Q6ZMK1 362 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HTR3DQ70Z44 454 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GALNT10Q86SR1 603 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RBM23Q86U06 439 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 XYLT1Q86Y38 959 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PLPP6Q8IY26 295 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DPP10Q8N608 796 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RDH13Q8NBN7 331 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 KCTD6Q8NC69 237 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF555Q8NEP9 628 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DNERQ8NFT8 737 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 MAGEE2Q8TD90 523 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 LPAR1Q92633 364 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GLMNQ92990 594 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CCDC17Q96LX7 622 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TEKT3Q9BXF9 490 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DCSTAMPQ9H295 470 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SPNS1Q9H2V7 528 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 POLR3BQ9NW08 1133 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EHD3Q9NZN3 535 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 KIF17Q9P2E2 1029 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DNAJB9Q9UBS3 223 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 USP18Q9UMW8 372 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 KLK4Q9Y5K2 254 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 BTAF1O14981 1849 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PRR23AA6NEV1 266 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EFCAB9A8MZ26 197 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ATP6V1G2-DDX39BF2Z307 99 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 APOL1O14791 398 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TFECO14948 347 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 KCNN4O15554 427 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ARHGEF9O43307 516 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PROM1O43490 865 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HRO43593 1189 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DPM1O60762 260 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CYP7B1O75881 506 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 METTL18O95568 372 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PAHP00439 452 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 C2P06681 752 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 FGF4P08620 206 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PRR35P0CG20 571 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC2A3P11169 496 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CYP2A6P11509 494 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HOXD8P13378 290 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HRH2P25021 359 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 MIPP30301 263 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC15A1P46059 708 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PPP3CCP48454 512 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RAB25P57735 213 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PLCL1Q15111 1095 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PPM1JQ5JR12 505 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms