RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 HDAC10Q969S8 669 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CNDP2Q96KP4 475 aaKnown RBP12.34□□□□□ -0.43
TRA2A-209ENST00000494255 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CHRAC1Q9NRG0 131 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 EVA1BQ9NVM1 165 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 SLC2A6Q9UGQ3 507 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 TMPRSS11EQ9UL52 423 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PLXNB3Q9ULL4 1909 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 TRIM38O00635 465 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 YY2O15391 372 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 GPR39O43194 453 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 GRID2O43424 1007 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 RAD51CO43502 376 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 SIGLEC6O43699 453 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 NUAK1O60285 661 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 CBFA2T3O75081 653 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 KCNK5O95279 499 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 FUCA1P04066 466 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 CELA2BP08218 269 aaPredicted RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 RALBP11234 206 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 IVDP26440 423 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 ARSDP51689 593 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 ACVR1Q04771 509 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 LRP8Q14114 963 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 TRIP6Q15654 476 aaKnown RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 DNAJC21Q5F1R6 531 aaKnown RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 ZCCHC8Q6NZY4 707 aaKnown RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 NXPE1Q8N323 547 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 OR13J1Q8NGT2 312 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 OR6P1Q8NGX9 317 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 HEXDCQ8WVB3 486 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 GLMNQ92990 594 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 DCUN1D1Q96GG9 259 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 TTC1Q99614 292 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 KIFC1Q9BW19 673 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 ANAPC5Q9UJX4 755 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 GPR34Q9UPC5 381 aa12.33□□□□□ -0.44
TRA2A-209ENST00000494255 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
TRA2A-209ENST00000494255 LAMA1P25391 3075 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 MAGEB16A2A368 324 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CTAGE15A4D2H0 777 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CFAP99D6REC4 459 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 KMOO15229 486 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 TNFSF14O43557 240 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CTAGE8P0CG41 777 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 PAMP19021 973 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 NMBRP28336 390 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ITGA8P53708 1063 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 DAB2P98082 770 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CTBSQ01459 385 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CHST15Q7LFX5 561 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CTAGE6Q86UF2 777 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 LRRTM4Q86VH4 590 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CTAGE4Q8IX94 777 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 OR4L1Q8NH43 312 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 BAHD1Q8TBE0 780 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ZNF778Q96MU6 729 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 COPS8Q99627 209 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 NCKIPSDQ9NZQ3 722 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 PRKAB1Q9Y478 270 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 OR51F1A6NGY5 319 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 CHUKO15111 745 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 GOT2P00505 430 aaKnown RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 GIMD1P0DJR0 217 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ACP5P13686 325 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ACRV1P26436 265 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 PPARGP37231 505 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ACTR1BP42025 376 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 MAGEA3P43357 314 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 RPIAP49247 311 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 DUSP3P51452 185 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 ACTR1AP61163 376 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 SIM1P81133 766 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 FASTKD1Q53R41 847 aaKnown RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 C6orf132Q5T0Z8 1188 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 LYPLAL1Q5VWZ2 237 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
TRA2A-209ENST00000494255 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
TRA2A-209ENST00000494255 SLC30A9Q6PML9 568 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms