RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PLEKHM3Q6ZWE6 761 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MTSS1LQ765P7 747 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC186Q7Z3E2 898 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 GPR180Q86V85 440 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 DNAAF5Q86Y56 855 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 EPHX4Q8IUS5 362 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 FOXP4Q8IVH2 680 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 WDR63Q8IWG1 891 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 TEX11Q8IYF3 940 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 NAGSQ8N159 534 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MAB21L3Q8N8X9 362 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CNBD1Q8NA66 436 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 POC5Q8NA72 575 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 AVL9Q8NBF6 648 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 POGLUT1Q8NBL1 392 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 NEXN-AS1Q8NBZ9 246 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CSNK2A3Q8NEV1 391 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 THAP6Q8TBB0 222 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 AFAP1L1Q8TED9 768 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 DUSP19Q8WTR2 217 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MMABQ96EY8 250 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CDCA5Q96FF9 252 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PGAP3Q96FM1 320 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM19Q96HH6 336 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 SLC41A2Q96JW4 573 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 C1orf74Q96LT6 269 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 C3orf30Q96M34 536 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 QRFPRQ96P65 431 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 IL17FQ96PD4 163 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 UHRF2Q96PU4 802 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 NUDCD1Q96RS6 583 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 FAM110AQ9BQ89 295 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PCGF1Q9BSM1 259 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 UBTD1Q9HAC8 227 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MKKSQ9NPJ1 570 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 HINT3Q9NQE9 182 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ABCF3Q9NUQ8 709 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 FAM118AQ9NWS6 357 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 OCIAD1Q9NX40 245 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 TAB2Q9NYJ8 693 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CWC15Q9P013 229 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ABI3Q9P2A4 366 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CPSF2Q9P2I0 782 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CEPT1Q9Y6K0 416 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 EVPLQ92817 2033 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 LOC100509620A0A075B734 347 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 IGHV4OR15-8A0A075B7B6 117 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM237AA0A1B0GTK4 181 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 KANSL1LA0AUZ9 987 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 CLEC18AA5D8T8 446 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM172BPA6NC97 362 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 C15orf62A8K5M9 175 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPCL2B2RXH8 293 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM72CH0Y354 149 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 H0Y626 953 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DVL1O14640 695 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SPINT2O43291 252 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 HCRTR2O43614 444 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 GPC4O75487 556 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 NKX2-2O95096 273 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ZBTB11O95625 1053 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 AFPP02771 609 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RB1P06400 928 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 CYC1P08574 325 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 G6PDP11413 515 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 IL7RP16871 459 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF23P17027 643 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 MAOAP21397 527 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 UBA1P22314 1058 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DGKAP23743 735 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 NR2F2P24468 414 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ITGB8P26012 769 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TNFRSF8P28908 595 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 KRT2P35908 639 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 EIF2S3P41091 472 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PIK3CAP42336 1068 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SLC15A1P46059 708 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 NRIP1P48552 1158 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PPP5CP53041 499 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DVL1P1P54792 670 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PITX1P78337 314 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PDE1BQ01064 536 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DDR1Q08345 913 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 BFSP1Q12934 665 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 COASYQ13057 564 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DHX34Q14147 1143 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SF3B4Q15427 424 aaKnown RBP eCLIP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 EFNB3Q15768 340 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 C2orf68Q2NKX9 166 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ASTE1Q2TB18 679 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PCGF3Q3KNV8 242 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF672Q499Z4 452 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM35AQ53FP2 167 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SOWAHCQ53LP3 525 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 CXorf66Q5JRM2 361 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 C9orf152Q5JTZ5 239 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DCST1Q5T197 706 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PDSS1Q5T2R2 415 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM72AQ5TYM5 149 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms