RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	CCHCR1	Q8TD31	782 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	AP2M1	Q96CW1	435 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	AGAP2	Q99490	1192 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	FRMD8	Q9BZ67	464 aa	Predicted RBP	18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	PCDH9	Q9HC56	1237 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	HAUS2	Q9NVX0	235 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	SEPT10	Q9P0V9	454 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	SUFU	Q9UMX1	484 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	DRG1	Q9Y295	367 aa	Known RBP	18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	LOC400499	M0QZD8	3231 aa		18.7	■□□□□ 0.58
ABCA2-222	ENST00000494046	NOBOX	O60393	691 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	SHOX2	O60902	331 aa	Predicted RBP	18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	TCEA3	O75764	348 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	CLDN7	O95471	211 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	SOD1	P00441	154 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	RPLP0	P05388	317 aa	Known RBP	18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	MMP2	P08253	660 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	ADCY8	P40145	1251 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	ADCY2	Q08462	1091 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	TAZ	Q16635	292 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	TRIM74	Q86UV6	250 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	EPB41L4B	Q9H329	900 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	TMEM98	Q9Y2Y6	226 aa		18.69	■□□□□ 0.58
ABCA2-222	ENST00000494046	CAPN8	A6NHC0	703 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	NTN3	O00634	580 aa	Predicted RBP	18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	AK4	P27144	223 aa	Predicted RBP	18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	DPT	Q07507	201 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	TRIP13	Q15645	432 aa	Predicted RBP	18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	OGFOD3	Q6PK18	319 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	GSTA5	Q7RTV2	222 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	KDELC2	Q7Z4H8	507 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	B3GNT8	Q7Z7M8	397 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	CROCCP2	Q86T23	111 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	HOOK3	Q86VS8	718 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	NRROS	Q86YC3	692 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	TTC13	Q8NBP0	860 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	GFM1	Q96RP9	751 aa	Known RBP	18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	FAM118B	Q9BPY3	351 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	FOXP3	Q9BZS1	431 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046	ANAPC5	Q9UJX4	755 aa		18.68	■□□□□ 0.58
ABCA2-222	ENST00000494046		A0A1W2PQM1	296 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ZNF487	B1APH4	448 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	AGRP	O00253	132 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ZNF30	P17039	623 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	NR1D1	P20393	614 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	CA4	P22748	312 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	STC1	P52823	247 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ITGA8	P53708	1063 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	IFI35	P80217	286 aa	Predicted RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	KRT71	Q3SY84	523 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	LSMEM2	Q8N112	164 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	WDR48	Q8TAF3	677 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	GPBAR1	Q8TDU6	330 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ZNF578	Q96N58	590 aa	Predicted RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	AGAP3	Q96P47	875 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	RIOK2	Q9BVS4	552 aa	Known RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	CAPS2	Q9BXY5	557 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	CENPH	Q9H3R5	247 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	DNPEP	Q9ULA0	475 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ZNF148	Q9UQR1	794 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	PLEKHM1	Q9Y4G2	1056 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ST14	Q9Y5Y6	855 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	RNF215	Q9Y6U7	377 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ERICH4	A6NGS2	130 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	INPP4B	O15327	924 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	TP73	O15350	636 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	MAZ	P56270	477 aa	Known RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ILF3	Q12906	894 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	GALNT3	Q14435	633 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	QPCT	Q16769	361 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	C14orf28	Q4W4Y0	310 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	CERCAM	Q5T4B2	595 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	SLC30A9	Q6PML9	568 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	BBS12	Q6ZW61	710 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	MARK2	Q7KZI7	788 aa	Known RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ARFGAP2	Q8N6H7	521 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	OLFM3	Q96PB7	478 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	LRRN3	Q9H3W5	708 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ASCL3	Q9NQ33	180 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	LRIT1	Q9P2V4	623 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	SAE1	Q9UBE0	346 aa	Predicted RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	SLC17A4	Q9Y2C5	497 aa		18.67	■□□□□ 0.58
ABCA2-222	ENST00000494046	IGSF10	Q6WRI0	2623 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	C1orf232	A0A0U1RR37	186 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	NDC80	O14777	642 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	RIPK2	O43353	540 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	DXO	O77932	396 aa	Known RBP	18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	GLB1	P16278	677 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	TEAD1	P28347	426 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	PCBP4	P57723	403 aa	Known RBP	18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	CTBS	Q01459	385 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	PDK1	Q15118	436 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	OASL	Q15646	514 aa	Known RBP	18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	ADAMTSL4	Q6UY14	1074 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	CCDC25	Q86WR0	208 aa		18.66	■□□□□ 0.58
ABCA2-222	ENST00000494046	VSIG1	Q86XK7	387 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms