RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CRTAMO95727 393 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 FASLGP48023 281 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 GABREP78334 506 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 SPARCL1Q14515 664 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 LDLRAP1Q5SW96 308 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 IGF2-ASQ6U949 168 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 CRTC3Q6UUV7 619 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 LRRTM4Q86VH4 590 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 LSMEM2Q8N112 164 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 DDHD1Q8NEL9 900 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 OR4K2Q8NGD2 314 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 C1orf54Q8WWF1 131 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 LIN37Q96GY3 246 aaPredicted RBP22.34■■□□□ 1.17
SNIP1-203ENST00000493916 TIMM29Q9BSF4 260 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 ZCCHC2Q9C0B9 1178 aaKnown RBP22.34■■□□□ 1.17
SNIP1-203ENST00000493916 ZKSCAN5Q9Y2L8 839 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 CACNA1BQ00975 2339 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 ARHGEF17Q96PE2 2063 aaPredicted RBP22.34■■□□□ 1.17
SNIP1-203ENST00000493916 LAMA5O15230 3695 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 CDK14O94921 469 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 AP2A1O95782 977 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 EML2O95834 649 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 MPOP05164 745 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 SLC2A4P14672 509 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 CCKBRP32239 447 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 ZNF140P52738 457 aaPredicted RBP22.33■■□□□ 1.17
SNIP1-203ENST00000493916 BIRC2Q13490 618 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 SIX1Q15475 284 aaPredicted RBP22.33■■□□□ 1.17
SNIP1-203ENST00000493916 CLPPQ16740 277 aaPredicted RBP22.33■■□□□ 1.17
SNIP1-203ENST00000493916 B3GNT8Q7Z7M8 397 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 ZNF547Q8IVP9 402 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 GDAP1Q8TB36 358 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 SLC37A2Q8TED4 501 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 TMEM74Q96NL1 305 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 SATB2Q9UPW6 733 aa22.33■■□□□ 1.17
SNIP1-203ENST00000493916 PKD1L2Q7Z442 2459 aa22.33■■□□□ 1.16
SNIP1-203ENST00000493916 ITPR1Q14643 2758 aa22.33■■□□□ 1.16
SNIP1-203ENST00000493916 ZFC3H1O60293 1989 aaKnown RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 ZFHX4Q86UP3 3567 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 CCDC187A0A096LP49 1063 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 A0A1W2PNU3 283 aaPredicted RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 PRR19A6NJB7 356 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 PPM1DO15297 605 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 GPR39O43194 453 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 B4GAT1O43505 415 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A9O60656 530 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 KRT37O76014 449 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 PRAMEF1O95521 474 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 F3P13726 295 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 ZNF7P17097 686 aaPredicted RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A6P19224 532 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A1P22309 533 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A4P22310 534 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A3P35503 534 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A5P35504 534 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 ACTN2P35609 894 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 INHBCP55103 352 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 TMEM115Q12893 351 aaPredicted RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 GTF2H3Q13889 308 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 PTPRCAPQ14761 206 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 CCNG2Q16589 344 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 TBC1D25Q3MII6 688 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 DRICH1Q6PGQ1 229 aaPredicted RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 IYDQ6PHW0 289 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 SNIP1Q8TAD8 396 aaKnown RBP22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A7Q9HAW7 530 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A10Q9HAW8 530 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 UGT1A8Q9HAW9 530 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 KLC4Q9NSK0 619 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 ZNF148Q9UQR1 794 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 KCTD3Q9Y597 815 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 PCDHGA8Q9Y5G5 932 aa22.32■■□□□ 1.16
SNIP1-203ENST00000493916 APC2O95996 2303 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 OR5K4A6NMS3 321 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 ERI2A8K979 691 aaKnown RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 CA5AP35218 305 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 OR1D5P58170 312 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 ZFP36L1Q07352 338 aaKnown RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 EIF3IQ13347 325 aaKnown RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 INSCQ1MX18 579 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 C3orf38Q5JPI3 329 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 GPRC6AQ5T6X5 926 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 WDR36Q8NI36 951 aaKnown RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 ZNF398Q8TD17 642 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 MAIP1Q8WWC4 291 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 ZNF578Q96N58 590 aaPredicted RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 STRADBQ9C0K7 418 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 SARS2Q9NP81 518 aaKnown RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 SLC23A2Q9UGH3 650 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 FKBPLQ9UIM3 349 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 ATXN7L1Q9ULK2 861 aaPredicted RBP22.31■■□□□ 1.16
SNIP1-203ENST00000493916 CELSR3Q9NYQ7 3312 aa22.31■■□□□ 1.16
SNIP1-203ENST00000493916 A0A087WV48 116 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 KIR2DS5A0A0G2JLQ3 304 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 A0A0G2JNG1 304 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 KIR2DS3K7RE56 304 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 LDB2O43679 373 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 TLX3O43711 291 aaPredicted RBP22.3■■□□□ 1.16
SNIP1-203ENST00000493916 SRP72O76094 671 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms