RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ZNF648Q5T619 568 aaPredicted RBP23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 WDR74Q6RFH5 385 aaPredicted RBP23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 CRTC3Q6UUV7 619 aa23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 P3H4Q92791 437 aa23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 PMEPA1Q969W9 287 aa23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 PCDHGA4Q9Y5G9 962 aa23.39■■□□□ 1.33
RHBDD3-206ENST00000493894 CFAP46Q8IYW2 2715 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 EFCAB7A8K855 629 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 B4E171 279 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 BPIP17213 487 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 TSPAN7P41732 249 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 TNNT3P45378 269 aaPredicted RBP23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 MAPK9P45984 424 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 CLCNKAP51800 687 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 RAB15P59190 212 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 INSCQ1MX18 579 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 PLA2G4EQ3MJ16 856 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 TFDP3Q5H9I0 405 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 ADGRG6Q86SQ4 1221 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 PLEKHG4BQ96PX9 1271 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 ASPSCR1Q9BZE9 553 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 KLC4Q9NSK0 619 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 SLC39A1Q9NY26 324 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 KLHL8Q9P2G9 620 aaPredicted RBP23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 PDP2Q9P2J9 529 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 FAM153AQ9UHL3 310 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 SPO11Q9Y5K1 396 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 ALG6Q9Y672 507 aa23.38■■□□□ 1.33
RHBDD3-206ENST00000493894 CHUKO15111 745 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 NFKB1P19838 968 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 LLGL1Q15334 1064 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 SNAP47Q5SQN1 464 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 SARM1Q6SZW1 724 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 LRRTM4Q86VH4 590 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 CCDC50Q8IVM0 306 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 KATNAL2Q8IYT4 538 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 JPH3Q8WXH2 748 aaPredicted RBP23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 NCSTNQ92542 709 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 TRIM5Q9C035 493 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 GOLPH3Q9H4A6 298 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 EPB41L1Q9H4G0 881 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 PRDM8Q9NQV8 689 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 OCIAD1Q9NX40 245 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 CPNE7Q9UBL6 633 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 B3GALT1Q9Y5Z6 326 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 SDK2Q58EX2 2172 aa23.37■■□□□ 1.33
RHBDD3-206ENST00000493894 hCG_1818297A0A087WSY0 165 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 LILRA5A6NI73 299 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 KMOO15229 486 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 ITGB2P05107 769 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 CD68P34810 354 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 ARSDP51689 593 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 WASHC5Q12768 1159 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 DCAF12Q5T6F0 453 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 ZC3H18Q86VM9 953 aaKnown RBP23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 TC2NQ8N9U0 490 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 HAUS1Q96CS2 278 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 RBM41Q96IZ5 413 aaKnown RBP23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 VPS35Q96QK1 796 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 VAT1Q99536 393 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 ARHGAP9Q9BRR9 750 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 TIMM29Q9BSF4 260 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 TRABDQ9H4I3 376 aa23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.36■■□□□ 1.33
RHBDD3-206ENST00000493894 A8MU76 341 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 AURKAO14965 403 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 VEGFDO43915 354 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 MTX2O75431 263 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 ZRANB2O95218 330 aaKnown RBP eCLIP23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 HMGCLP35914 325 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 WNT3AP56704 352 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 UBE2IP63279 158 aaKnown RBP23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 ADCY2Q08462 1091 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 C11orf63Q6NUN7 778 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 TRIM48Q8IWZ4 208 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 IL22RA1Q8N6P7 574 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 BMPERQ8N8U9 685 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 QKIQ96PU8 341 aaKnown RBP eCLIP23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 TEFMQ96QE5 360 aaKnown RBP23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 LUC7LQ9NQ29 371 aaKnown RBP23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 ZNF462Q96JM2 2506 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 COL6A6A6NMZ7 2263 aa23.35■■□□□ 1.33
RHBDD3-206ENST00000493894 LOC285095A0A1B0GVY8 99 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 PDZK1P1A8MUH7 402 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 CDK14O94921 469 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 LCA5LO95447 670 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 ZNF7P17097 686 aaPredicted RBP23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 UGT1A3P35503 534 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 SPA17Q15506 151 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 ANKS6Q68DC2 871 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 KDELC1Q6UW63 502 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 ARHGAP22Q7Z5H3 698 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 RCOR2Q8IZ40 523 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 GDAP1Q8TB36 358 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 HTR3CQ8WXA8 447 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 EXTL1Q92935 676 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 NKD1Q969G9 470 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 TBC1D10AQ9BXI6 508 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 BPIFA1Q9NP55 256 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 HACD3Q9P035 362 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms