RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SETD4Q9NVD3 440 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 C14orf166Q9Y224 244 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OVOS2A0A0G2JMS6 1433 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OVOS2A0A0J9YW53 1432 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 USP6P35125 1406 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OVOS2Q6IE36 1432 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ITGA10O75578 1167 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF286BP0CG31 522 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CCNB1P14635 433 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 LPOP22079 712 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BDNFP23560 247 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CD40LGP29965 261 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 SREBF1P36956 1147 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 APLP1P51693 650 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 POLR2JP52435 117 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 KCNJ2P63252 427 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 LAPTM5Q13571 262 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ARFRP1Q13795 201 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 SNAP47Q5SQN1 464 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 SPPL2CQ8IUH8 684 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CPSF7Q8N684 471 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 HJURPQ8NCD3 748 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CNDP2Q96KP4 475 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 KLHL15Q96M94 604 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ULBP1Q9BZM6 244 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 C14orf105Q9NVL8 296 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 RCOR3Q9P2K3 495 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TEX13CA0A0J9YWL9 993 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF878C9JN71 531 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TRAFD1O14545 582 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ADAMDEC1O15204 470 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 AKAP3O75969 853 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TGDSO95455 350 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ITGB1P05556 798 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FESP07332 822 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GDI2P50395 445 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CSTF1Q05048 431 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TIGD2Q4W5G0 525 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 SPIN3Q5JUX0 258 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GTF2IRD2BQ6EKJ0 949 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GTF2IRD2Q86UP8 949 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PHYKPLQ8IUZ5 450 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF565Q8N9K5 539 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OR4L1Q8NH43 312 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FCGR1BQ92637 280 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TAMM41Q96BW9 452 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TIFAQ96CG3 184 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 MFSD14AQ96MC6 490 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 UROC1Q96N76 676 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 LACRTQ9GZZ8 138 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TM9SF3Q9HD45 589 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 C11orf16Q9NQ32 467 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 RAB21Q9UL25 225 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF490Q9ULM2 529 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CNOT6Q9ULM6 557 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CLDN4O14493 209 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ARP10275 920 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CHKAP35790 457 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 SLC10A7Q0GE19 358 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 AIMP2Q13155 320 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CDK10Q15131 360 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 FAM189A2Q15884 450 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PPP1R26Q5T8A7 1209 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 METTL7BQ6UX53 244 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 CEP68Q76N32 757 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 DNAJB7Q7Z6W7 309 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF410Q86VK4 478 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 UBE2J2Q8N2K1 259 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GALNT15Q8N3T1 639 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF709Q8N972 641 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BRSK1Q8TDC3 778 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 XAGE5Q8WWM1 108 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 JSRP1Q96MG2 331 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TRMOQ9BU70 441 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 NUDT15Q9NV35 164 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 POLR3BQ9NW08 1133 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 IFT52Q9Y366 437 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 E5RJQ4 531 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BUD23O43709 281 aaKnown RBP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 DNAJA2O60884 412 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 IL1BP01584 269 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ITGA2BP08514 1039 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 IL1R1P14778 569 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 HNRNPLP14866 589 aaKnown RBP eCLIP7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ACVR2AP27037 513 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TNFRSF8P28908 595 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 AQP1P29972 269 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 HSD17B2P37059 387 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 MAP3K8P41279 467 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 BLMHQ13867 455 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 WSCD2Q2TBF2 565 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF792Q3KQV3 632 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 POM121L1PQ3SYA9 428 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 UBAP2Q5T6F2 1119 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms