RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 RPLP0P05388 317 aaKnown RBP13.48□□□□□ -0.25
PDCD11-206ENST00000493610 ACP5P13686 325 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 PSMA3P25788 255 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 SPAM1P38567 509 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 GRIA1P42261 906 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 CTSCP53634 463 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 OR1D5P58170 312 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 LRP8Q14114 963 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 SEL1L2Q5TEA6 688 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 RBM44Q6ZP01 1051 aaKnown RBP13.48□□□□□ -0.25
PDCD11-206ENST00000493610 CCNJLQ8IV13 435 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 SLITRK4Q8IW52 837 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 SFRP1Q8N474 314 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 TAB3Q8N5C8 712 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-206ENST00000493610 RASGEF1AQ8N9B8 481 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-206ENST00000493610 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 OR4K2Q8NGD2 314 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 OR6C4Q8NGE1 309 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 NAT14Q8WUY8 206 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 NXPE2Q96DL1 559 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 ABCG4Q9H172 646 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 SMOXQ9NWM0 555 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 FKBPLQ9UIM3 349 aa13.48□□□□□ -0.25
PDCD11-206ENST00000493610 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 GLYATL1P3A0A0U1RQE8 302 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 CCL22O00626 93 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 DXOO77932 396 aaKnown RBP13.47□□□□□ -0.25
PDCD11-206ENST00000493610 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
PDCD11-206ENST00000493610 AP2A1O95782 977 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ZSCAN5DPP0CG00 497 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 BRAFP15056 766 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 TPH1P17752 444 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 LPOP22079 712 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-206ENST00000493610 CD1CP29017 333 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 CXCR5P32302 372 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 CSF2RBP32927 897 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 FASLGP48023 281 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-206ENST00000493610 SNX1Q13596 522 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 P3H1Q32P28 736 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 GPRC6AQ5T6X5 926 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ARHGEF18Q6ZSZ5 1173 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 PHYKPLQ8IUZ5 450 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 TRIM58Q8NG06 486 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 PRDM8Q9NQV8 689 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 PIH1D1Q9NWS0 290 aaKnown RBP13.47□□□□□ -0.25
PDCD11-206ENST00000493610 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ACACAQ13085 2346 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ADAMTS20P59510 1910 aa13.47□□□□□ -0.25
PDCD11-206ENST00000493610 ANKRD11Q6UB99 2663 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 GOLGA6L3A6NEY3 463 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 GPR89AB7ZAQ6 455 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 VEGFDO43915 354 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 PRSS56P0CW18 603 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 HOXB3P14651 431 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 ZNF7P17097 686 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 LSSP48449 732 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 UBE2IP63279 158 aaKnown RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 GABREP78334 506 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 SQSTM1Q13501 440 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 SPIDRQ14159 915 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 PRPSAP1Q14558 356 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 CCNG2Q16589 344 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 PLA2G4EQ3MJ16 856 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 DRICH1Q6PGQ1 229 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 IGF2-ASQ6U949 168 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 ZNF761Q86XN6 746 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 PRELID2Q8N945 189 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 NUDT22Q9BRQ3 303 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 FRMD8P1Q9BZ68 369 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 SEMA6CQ9H3T2 930 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 KLC4Q9NSK0 619 aa13.46□□□□□ -0.25
PDCD11-206ENST00000493610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 ZNF624Q9P2J8 865 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-206ENST00000493610 LAMA5O15230 3695 aa13.46□□□□□ -0.26
PDCD11-206ENST00000493610 URB1O60287 2271 aaKnown RBP13.46□□□□□ -0.26
PDCD11-206ENST00000493610 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.26
PDCD11-206ENST00000493610 A0A087WV48 116 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 TRBV5-4A0A0C4DH59 114 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 USP27XA6NNY8 438 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 CDRT15L2A8MXV6 281 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 PPFIA2O75334 1257 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 SRP72O76094 671 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms