RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MORC2Q9Y6X9 1032 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 DENND4CQ5VZ89 1909 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 ATG2BQ96BY7 2078 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TP53BP1Q12888 1972 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC171Q6TFL3 1326 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 NPIPB11E5RHQ5 1161 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 F5H6K3 240 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 WDR46O15213 610 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CTAGE5O15320 804 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 SEPT4O43236 478 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 XPNPEP2O43895 674 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CAND2O75155 1236 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CSPG5O95196 566 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 SNAI1O95863 264 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 KRT18P05783 430 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 IGHV4-30-4P0DP06 118 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 ACP5P13686 325 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 MYF6P23409 242 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 GNALP38405 381 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 RGS2P41220 211 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 RANBP2P49792 3224 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 MMP14P50281 582 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 NEK3P51956 506 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CRIP2P52943 208 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 PNLIPRP1P54315 467 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 KLRC3Q07444 240 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 FAM27E3Q08E93 113 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 IKQ13123 557 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 LPIN1Q14693 890 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 TCTN1Q2MV58 587 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 HSP90AB4PQ58FF6 505 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 RUNDC3AQ59EK9 446 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 CHD1LQ86WJ1 897 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 SMC5Q8IY18 1101 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 AADATQ8N5Z0 425 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 MAB21L3Q8N8X9 362 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 OR4N2Q8NGD1 307 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 SECTM1Q8WVN6 248 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 ZBTB10Q96DT7 871 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 FEM1CQ96JP0 617 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 TRAPPC9Q96Q05 1148 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 OR1F2PQ96R84 312 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 SLF1Q9BQI6 1058 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 TMEM47Q9BQJ4 181 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 MMTAG2Q9BU76 263 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 UBA5Q9GZZ9 404 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 MMP28Q9H239 520 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 C11orf49Q9H6J7 331 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 WDR6Q9NNW5 1121 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 GEMIN8Q9NWZ8 242 aaKnown RBP3.23□□□□□ -1.89
PTCD3-218ENST00000493430 KCND3Q9UK17 655 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 STX8Q9UNK0 236 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 TSC2P49815 1807 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 DOCK8Q8NF50 2099 aa3.23□□□□□ -1.89
PTCD3-218ENST00000493430 TTC41PQ6P2S7 1318 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 IGHV4OR15-8A0A075B7B6 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SLC15A5A6NIM6 579 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 TSPY2A6NKD2 308 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 C19orf81C9J6K1 198 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SKAP2O75563 359 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE7O76087 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 PMS2P2O95744 297 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE12FP0CL80 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE12GP0CL81 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE12IP0CL82 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 TSPY3P0CV98 308 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 TSPY8P0CW00 308 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 HSPD1P10809 573 aaKnown RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 MYOGP15173 224 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GM2AP17900 193 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 CALML3P27482 149 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SSTR2P30874 369 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 PNPLA4P41247 253 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 MVDP53602 400 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 NUCB1Q02818 461 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 TLE2Q04725 743 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE1Q13065 139 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GAGE4Q13068 117 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 DMP1Q13316 513 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 PDCLQ13371 301 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 CAPSQ13938 189 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 COG2Q14746 738 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 RBBP5Q15291 538 aaKnown RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SHHQ15465 462 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SBK1Q52WX2 424 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 HIST2H2BCQ6DN03 193 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 CXCL17Q6UXB2 119 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 ARMCX2Q7L311 632 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 TRMT1LQ7Z2T5 733 aaKnown RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 MB21D2Q8IYB1 491 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-218ENST00000493430 USP38Q8NB14 1042 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 MCPH1Q8NEM0 835 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 RASSF8Q8NHQ8 419 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 STT3BQ8TCJ2 826 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 BADQ92934 168 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC136Q96JN2 1154 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 LRFN5Q96NI6 719 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GUCD1Q96NT3 240 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 PGLYRP2Q96PD5 576 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms