RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 ULK4Q96C45 1275 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 MFSD3Q96ES6 412 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 RTKNQ9BST9 563 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 LRRC1Q9BTT6 524 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 MRM3Q9HC36 420 aaKnown RBP16.67■□□□□ 0.26
RER1-208ENST00000493207 TREX1Q9NSU2 369 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 PCYT1BQ9Y5K3 369 aaPredicted RBP16.67■□□□□ 0.26
RER1-208ENST00000493207 CSNK1G3Q9Y6M4 447 aa16.67■□□□□ 0.26
RER1-208ENST00000493207 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 ZFC3H1O60293 1989 aaKnown RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 NEMP2A6NFY4 417 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 AGAP14A8MT82 685 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 ESPNB1AK53 854 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 SMAPO00193 183 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 VEGFDO43915 354 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 NUAK1O60285 661 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 BANF1O75531 89 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 CDK14O94921 469 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 MSH3P20585 1137 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 AKT1P31749 480 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 PRAMEP78395 509 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 SLC7A5Q01650 507 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 CACNG1Q06432 222 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 TMEM115Q12893 351 aaPredicted RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 GPR33Q49SQ1 333 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 DUPD1Q68J44 220 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 PSAPL1Q6NUJ1 521 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 AFTPHQ6ULP2 937 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 CRTC3Q6UUV7 619 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 GKN2Q86XP6 184 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 NXPE1Q8N323 547 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 MMGT1Q8N4V1 131 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 BBOF1Q8ND07 529 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 OR6P1Q8NGX9 317 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 CCL4L1Q8NHW4 92 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 TTC25Q96NG3 672 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 OR2M4Q96R27 311 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 TRIM56Q9BRZ2 755 aaKnown RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 ZCCHC2Q9C0B9 1178 aaKnown RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 RAB17Q9H0T7 212 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 RMI1Q9H9A7 625 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 NLGN3Q9NZ94 848 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 DOLKQ9UPQ8 538 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 PLEKHM1Q9Y4G2 1056 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 MAD1L1Q9Y6D9 718 aa16.66■□□□□ 0.26
RER1-208ENST00000493207 COL5A1P20908 1838 aaPredicted RBP16.66■□□□□ 0.26
RER1-208ENST00000493207 TRBV5-4A0A0C4DH59 114 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GPR89AB7ZAQ6 455 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 LMO7DNF2Z398 122 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 TRIM38O00635 465 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 NDC80O14777 642 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 TP73O15350 636 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GRID2O43424 1007 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 ANXA6P08133 673 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GPR89BP0CG08 455 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GIMD1P0DJR0 217 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 ALPPL2P10696 532 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 ACRV1P26436 265 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 FOXN2P32314 431 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 DHX9Q08211 1270 aaKnown RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 CALCOCO2Q13137 446 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GTF2H3Q13889 308 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 PLA2G4EQ3MJ16 856 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 MSS51Q4VC12 460 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 DNAJC21Q5F1R6 531 aaKnown RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 ARMC3Q5W041 872 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 CHST15Q7LFX5 561 aaPredicted RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 TAF8Q7Z7C8 310 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 SERPINA9Q86WD7 417 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 PIANPQ8IYJ0 282 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 OR4L1Q8NH43 312 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 OR4C6Q8NH72 309 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 GPBAR1Q8TDU6 330 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 CCDC97Q96F63 343 aaPredicted RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 SIGLEC10Q96LC7 697 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 CARD6Q9BX69 1037 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 SLC32A1Q9H598 525 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 TRNAU1APQ9NX07 287 aaKnown RBP16.65■□□□□ 0.26
RER1-208ENST00000493207 DLL3Q9NYJ7 618 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 WHRNQ9P202 907 aa16.65■□□□□ 0.26
RER1-208ENST00000493207 FAM237BA0A1B0GVD1 139 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 MAGEB16A2A368 324 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 DCDC2BA2VCK2 349 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 OR2AG2A6NM03 316 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 CHUKO15111 745 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 YY2O15391 372 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 SIGLEC6O43699 453 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 AK4P27144 223 aaPredicted RBP16.64■□□□□ 0.25
RER1-208ENST00000493207 CTBSQ01459 385 aa16.64■□□□□ 0.25
RER1-208ENST00000493207 ILF3Q12906 894 aaKnown RBP eCLIP16.64■□□□□ 0.259e-6■□□□□ 8
RER1-208ENST00000493207 SMAD1Q15797 465 aaKnown RBP16.64■□□□□ 0.25
RER1-208ENST00000493207 HIF1AQ16665 826 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms