RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 NRROSQ86YC3 692 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZDHHC21Q8IVQ6 265 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SERPINA12Q8IW75 414 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CISD2Q8N5K1 135 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CAMKVQ8NCB2 501 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NSUN7Q8NE18 718 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OR7G3Q8NG95 312 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TAS1R2Q8TE23 839 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DTD1Q8TEA8 209 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DCAF4Q8WV16 495 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZCCHC14Q8WYQ9 949 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TRIB2Q92519 343 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SLC25A36Q96CQ1 311 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OTUB2Q96DC9 234 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SLC6A18Q96N87 628 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LRFN5Q96NI6 719 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FCRL3Q96P31 734 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MED15Q96RN5 788 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TRIB1Q96RU8 372 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF607Q96SK3 696 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SSX3Q99909 188 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CITED1Q99966 193 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF416Q9BWM5 594 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 COL25A1Q9BXS0 654 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RAB17Q9H0T7 212 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 EPB41L1Q9H4G0 881 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RPF1Q9H9Y2 349 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DMAP1Q9NPF5 467 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 INTS9Q9NV88 658 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ARMC1Q9NVT9 282 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CLEC5AQ9NY25 188 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MPP6Q9NZW5 540 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 AMFRQ9UKV5 643 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PALD1Q9ULE6 856 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MRPS7Q9Y2R9 242 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHGB1Q9Y5G3 927 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PLB1Q6P1J6 1458 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MN1Q10571 1320 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NPHP3Q7Z494 1330 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MAP3K5Q99683 1374 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PTCH1Q13635 1447 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PPIP5K1Q6PFW1 1433 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 A0A0B4J293 547 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 A0A0J9YYE9 177 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FAM237BA0A1B0GVD1 139 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 A0A1B0GVG6 124 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MTMR11A4FU01 709 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OOEPA6NGQ2 149 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PCP4L1A6NKN8 68 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 B8ZZF3 427 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FAM47E-STBD1D6RA91 191 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PRSS44E7EML9 344 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 H0Y858 1186 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LINC01387J3KSC0 135 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 AGPSO00116 658 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SLC9A3R1O14745 358 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ADAMDEC1O15204 470 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SEPT4O43236 478 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 COCHO43405 550 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 B4GAT1O43505 415 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KCNQ3O43525 872 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DENRO43583 198 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PI15O43692 258 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LPXNO60711 386 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SAP30O75446 220 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FRAT2O75474 233 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TAF5LO75529 589 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DDNO94850 711 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RPP14O95059 124 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KAT7O95251 611 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ASS1P00966 412 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TRBC1P01850 177 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FGBP02675 491 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GNAI2P04899 355 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KRT16P08779 473 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GSTP1P09211 210 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GSTM1P09488 218 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 EN2P19622 333 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SYT1P21579 422 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MYF6P23409 242 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CYP2F1P24903 491 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 UCP1P25874 307 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GIFP27352 417 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CDC25BP30305 580 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OTX2P32243 289 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CDKN1AP38936 164 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FRKP42685 505 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RPS5P46782 204 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FHITP49789 147 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RAP1GDS1P52306 607 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ARFIP2P53365 341 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PER3P56645 1201 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SPCS3P61009 180 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SRP54P61011 504 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC63Q05C16 580 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 POU4F2Q12837 409 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KLF10Q13118 480 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PRKAA1Q13131 559 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MADCAM1Q13477 382 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms