RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 APRTP07741 180 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ACP5P13686 325 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ETS1P14921 441 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 TCP1P17987 556 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 VCLP18206 1134 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ITGALP20701 1170 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 RPL22P35268 128 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 XIAPP98170 497 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 TMEM115Q12893 351 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.738e-6■■■□□ 18.9
CDC42SE1-206ENST00000492796 NFATC2Q13469 925 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 CAMK2BQ13554 666 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 SPIDRQ14159 915 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 PTPRCAPQ14761 206 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 POU6F1Q14863 301 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 NR1D2Q14995 579 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 CYP1B1Q16678 543 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 INSCQ1MX18 579 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF648Q5T619 568 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 GPRC6AQ5T6X5 926 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 PPP1R21Q6ZMI0 780 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 RBM44Q6ZP01 1051 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 SNX20Q7Z614 316 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 NAGSQ8N159 534 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 GLIS1Q8NBF1 620 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 AVL9Q8NBF6 648 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR52K1Q8NGK4 314 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR13C4Q8NGS5 318 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF398Q8TD17 642 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 STYXQ8WUJ0 223 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 NXPE2Q96DL1 559 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF514Q96K75 400 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 STN1Q9H668 368 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ASB8Q9H765 288 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 ARFGAP3Q9NP61 516 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 NLE1Q9NVX2 485 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 LRIT1Q9P2V4 623 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 FKBPLQ9UIM3 349 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 RIMKLBQ9ULI2 386 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 PRKAB1Q9Y478 270 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 PLEKHM1Q9Y4G2 1056 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 KCTD3Q9Y597 815 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 RNF215Q9Y6U7 377 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 GOLGA4Q13439 2230 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 HEATR9A2RTY3 570 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 KLHL33A6NCF5 533 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MROH6A6NGR9 719 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR5K4A6NMS3 321 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 GPR39O43194 453 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A9O60656 530 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ECEL1O95672 775 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 RPLP0P05388 317 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZSCAN5DPP0CG00 497 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 RALBP11234 206 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 F3P13726 295 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A6P19224 532 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 TPSB2P20231 275 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MSH3P20585 1137 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A1P22309 533 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A4P22310 534 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 PSMA3P25788 255 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 AKT1P31749 480 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MC4RP32245 332 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A3P35503 534 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 UGT1A5P35504 534 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 FASLGP48023 281 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 KCNJ1P48048 391 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MAZP56270 477 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 CLDN6P56747 220 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 BASP1P80723 227 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 BIRC2Q13490 618 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 SEPT6Q14141 434 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 TPSAB1Q15661 275 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 CLPPQ16740 277 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 SKIDA1Q1XH10 827 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 GPR33Q49SQ1 333 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 KHDC1Q4VXA5 237 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 CRTC3Q6UUV7 619 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 NLRP9Q7RTR0 991 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF438Q7Z4V0 828 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 SPRED1Q7Z699 444 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 PRUNE1Q86TP1 453 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 TRAPPC5Q8IUR0 188 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 CCNJLQ8IV13 435 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF547Q8IVP9 402 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 SFTPA2Q8IWL1 248 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 SFRP1Q8N474 314 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 ARL14Q8N4G2 192 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 COG1Q8WTW3 980 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 HEXDCQ8WVB3 486 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 PEX13Q92968 403 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 MS4A14Q96JA4 679 aa10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 DNAJC1Q96KC8 554 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-206ENST00000492796 GFM1Q96RP9 751 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms